Tc06v2_t019200.1

Overview
NameTc06v2_t019200.1
Unique NameTc06v2_t019200.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1347
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmannan endo-1,4-beta-mannosidase 6
NoteMannan endo-1,4-beta-mannosidase 6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597270
GenbankXM_007026193.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g019200Tc06v2_g019200Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p019200.1Tc06v2_p019200.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto351458auto351458Theobroma cacaoexon
exon-auto351459auto351459Theobroma cacaoexon
exon-auto351460auto351460Theobroma cacaoexon
exon-auto351461auto351461Theobroma cacaoexon
exon-auto351462auto351462Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto351463auto351463Theobroma cacaoCDS
CDS-auto351464auto351464Theobroma cacaoCDS
CDS-auto351465auto351465Theobroma cacaoCDS
CDS-auto351466auto351466Theobroma cacaoCDS
CDS-auto351467auto351467Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t019200.1 ID=Tc06v2_t019200.1|Name=Tc06v2_t019200.1|organism=Theobroma cacao|type=mRNA|length=1347bp
ATGGAAGCAGAATGGAGAGACAAAAAGCTTTATCCTTTACTCGGCATTCT
TTTGCTTTCGATTCTTCTCTACCTCAACTTCGGCAACACCAATCTCATTA
GTTTTCCGATCTCACGGCAACCTCGGTTGGATTTCGTGTCTGCAAACTCT
ACGCATTTCATTATCGTCAACGGTGGTGGTGCTGCGGAGAATCAGTCAGC
CGCCTACGTCAACGGATGGAACTCCTATTGGCTAATGCAGGAGAGCGTGT
GGGGTGGTCCGTCGAGATCGAGGGTGTCGAAGATGCTCCAGAGAGGCGCC
CAAATGGGGTTGACCGTCTGTAGAACTTGGGCCTTCAGCGATGGTAATGG
ACCTAATGCCTTGCAGATCTCTCCCGGTGTCTTTAACGAAAGAGTCTTTC
GGGGATTGGATTATGTGATTGTTGAAGCAAGGAAGCATGGGATTAGATTG
GTTCTTAGTTTGGTGAATAATTTGAATAACTTTGGTGGGAAGGCTCAGTA
TGTGAGATGGGCACAAGAAGCTGGAATTAATGTTTCTTCTTCAAGTGATT
CATTTTTTTCACACCCGATGATTAAAGATTACTACAAGGCTTACGTTAAG
GCAATTTTGTCTAGAAAGAACTCCTTGAGTGGTGTGAAGTATTCTGACGA
GCCAGCAATATTTGCTTGGGAGCTGATGAATGAGCCCCGGTGTGAGTCCA
GTTCCTCTGCTCCCATTCTTCAGGCATGGATCACTGAGATGGCTGCTTTT
GTCAAGAGTCTGGATCAAAAACATTTAGTGACTGTTGGACTTGAGGGGTT
TTATGGCCTCAATACGACTAAAGGACCGGAAGTAAATCCTGGGGAGTGGG
CAGCCTCACTTGGATCAGACTTTGTACAGAACTCAGCAATCGAGAACATT
GACTTTGCTTCAGTTCATGCATACCCTGATAGCTGGATACCACATGCTGA
TTTGGAAGAAAAGACTCGCTATCTTTCCCAGTGGGTGGATTCTCATATAA
GCGATGGGGATCAGGTGCTTAAAAAACCGATTCTCTTCACAGAAGTTGGC
TCTTTGGTGTATGTGAACAACCAAAGCATAGCTGACAAGGATATTCTATT
AAAGACCATGTACGATAAAATTTATGAGTCGGCAAAGAAGAGGCAAGCTG
GGGCAGGGGCCTTAATTTGGCAGTTACTAGTTGAAGGAGTGGAGGAATAT
GGTGACAGATTTTCCTTCATAGCATGGGATAAACCCTCCACCTATAAACT
GATACTAAGGCAATCGTGTAGGCTTCAAAGCATTTTCCCGAAGAGCAGTC
AGAATAGGAAACTTAGCAAGGATCCTTGCTCTGGTCAATTACCTTGA
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protein sequence of Tc06v2_p019200.1

>Tc06v2_p019200.1 ID=Tc06v2_p019200.1|Name=Tc06v2_p019200.1|organism=Theobroma cacao|type=polypeptide|length=449bp
MEAEWRDKKLYPLLGILLLSILLYLNFGNTNLISFPISRQPRLDFVSANS
THFIIVNGGGAAENQSAAYVNGWNSYWLMQESVWGGPSRSRVSKMLQRGA
QMGLTVCRTWAFSDGNGPNALQISPGVFNERVFRGLDYVIVEARKHGIRL
VLSLVNNLNNFGGKAQYVRWAQEAGINVSSSSDSFFSHPMIKDYYKAYVK
AILSRKNSLSGVKYSDEPAIFAWELMNEPRCESSSSAPILQAWITEMAAF
VKSLDQKHLVTVGLEGFYGLNTTKGPEVNPGEWAASLGSDFVQNSAIENI
DFASVHAYPDSWIPHADLEEKTRYLSQWVDSHISDGDQVLKKPILFTEVG
SLVYVNNQSIADKDILLKTMYDKIYESAKKRQAGAGALIWQLLVEGVEEY
GDRFSFIAWDKPSTYKLILRQSCRLQSIFPKSSQNRKLSKDPCSGQLP*
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