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Properties
| Property Name | Value |
|---|
| Note | Protein TRANSPORT INHIBITOR RESPONSE 1 |
| Model evidence | Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns |
| Product | protein TRANSPORT INHIBITOR RESPONSE 1, transcript variant X1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t016540.1 ID=Tc06v2_t016540.1|Name=Tc06v2_t016540.1|organism=Theobroma cacao|type=mRNA|length=1761bp
ATGGAATCGTGCGAGCTGAAGAGGTTCAAGGACTCGCCGAACTCGGACGA
GTCGGCTCGGCGATCCTCATTTCCCGACGAAGTGCTCGAGCGCGTTCTAT
CTCTTTTGAAATCTCACAGGGACAGGAGCTCCGTTTCTTTGGTTTGCAAG
GACTGGTACAACGCGGAACGGTGGTCGAGGGCTCACGTTTTCATCGGAAA
CTGTTACTCCGTCTCGCCGGAGATCGTCGCACGGCGGTTCCCGAAAATCC
GAAGCGTGACGTTGAAAGGGAAGCCTAGGTTTTCCGACTTCAACTTGGTG
CCGCAGAACTGGGGGGCCGATATCCACGCGTGGCTGGTCGTTTTCGCGGC
TAAATATCCATTCCTCGAAGAGCTTAGGCTTAAGCGAATGACAATCAGCG
ATGAAAGCTTGGAGTTTTTAGCGGTTTCTTTCCCCAACTTTAAAGCTCTC
TCGCTTTTGAGCTGCGATGGTTTTAGCACTAACGGACTCGCTGCCATTGC
CACTCACTGCAAGAACTTGACTGAGCTCGACATACAGGAGAACGGCATTG
ATGATAAAGGAGGTAGTTGGTTGAGCTGCTTCCCTGAAAGCTTCACATCA
TTGGAAGCACTGAACTTTGCCAACTTGACCAGTGATATTAATTTCGATGC
TCTTGAGAGGCTTGTAGGTAGGTGCAAGGCAATGAGGGTTTTAAAGGTCA
ACAGGAGCATATCCTTGGAACAATTACAAAGACTTCTTGTTAATGCTCCT
CAATTGGCCGAGCTTGGTACGGGCTCATTCTCACAAGAACTTACTTTCCG
CCAATATGAAGAGCTTGAAAGCACGTTAGGTAGTTGCAAGAATATACATG
CACTATCGGGTTTGTGGGAGGCCAAGGGCTTATATCTCCCTGCTTTATAT
TCTCTGTGCACACATCTGACTTTCTTGAACTTGAGCTATGCTCCTTTGCA
AAGTGGTGAACTCGCTAAGCTTCTTACTCACTGTCCACAACTACGACGCC
TTTGGGTCTTAGACACAGTAGAAGACAAAGGACTGGAGGCCGTTGGATTG
AACTGCCCGTTGCTTGAGGAACTTCGAGTTTTCCCTGCTGATCCCTTTGA
TGAGGATATTATCCATGGAGTCACTGAAGCTGGGTTTGTTGCTGTGTCTC
ATGGTTGCCCAAGACTCCACTATGTCCTCTATTTTTGTCGGCAGATGACT
AATGCAGCTGTAGCAACCATTGTACAGAACTGCCCTGATTTTACGCATTT
TCGTTTATGCATAATGGACCCAGGTCAACCAGATTATCTCACAAATGAAC
CTATGGATGAAGCTTTTGGTGCAGTGGTTAAGACATGCAGTAAACTCCAG
AGGCTTTCAGTTTCAGGTCTCTTAACTGATCTGACATTTGAGTATATTGG
TAGCTATGCTAAGAACTTGGAGACCCTTTCAGTGGCTTTTGCAGGCAGCA
GTGACTGGGGGATGCAGTGTGTTTTGAGAGGTTGTCCAAAACTAAGGAAA
CTTGAGATAAGAGACTGCCCATTTGGAAATGCGGCACTGCTTTCAGGTTT
GGAGAAGTATGAGTCCATGAGGTCACTTTGGATGTCAGCCTGCAATGTGA
CAATGAATGCTTGTAGGCTATTGGCGAAGGAGATGCCCAGATTGAATGTT
GAGGTAATGAAGGAGGATGGAAGTGATGGTATTCAAGCAGATAAAGTATA
TGTTTATCGTTCTATTGCAGGCCCAAGGAGGGATGCGCCACCATCTGTGC
TTACTCTCTGA back to topprotein sequence of Tc06v2_p016540.1 >Tc06v2_p016540.1 ID=Tc06v2_p016540.1|Name=Tc06v2_p016540.1|organism=Theobroma cacao|type=polypeptide|length=587bp
MESCELKRFKDSPNSDESARRSSFPDEVLERVLSLLKSHRDRSSVSLVCK
DWYNAERWSRAHVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLV
PQNWGADIHAWLVVFAAKYPFLEELRLKRMTISDESLEFLAVSFPNFKAL
SLLSCDGFSTNGLAAIATHCKNLTELDIQENGIDDKGGSWLSCFPESFTS
LEALNFANLTSDINFDALERLVGRCKAMRVLKVNRSISLEQLQRLLVNAP
QLAELGTGSFSQELTFRQYEELESTLGSCKNIHALSGLWEAKGLYLPALY
SLCTHLTFLNLSYAPLQSGELAKLLTHCPQLRRLWVLDTVEDKGLEAVGL
NCPLLEELRVFPADPFDEDIIHGVTEAGFVAVSHGCPRLHYVLYFCRQMT
NAAVATIVQNCPDFTHFRLCIMDPGQPDYLTNEPMDEAFGAVVKTCSKLQ
RLSVSGLLTDLTFEYIGSYAKNLETLSVAFAGSSDWGMQCVLRGCPKLRK
LEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNACRLLAKEMPRLNV
EVMKEDGSDGIQADKVYVYRSIAGPRRDAPPSVLTL* back to top
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