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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns |
| Product | protein TRANSPORT INHIBITOR RESPONSE 1, transcript variant X1 |
| Note | Protein TRANSPORT INHIBITOR RESPONSE 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t016530.1 ID=Tc06v2_t016530.1|Name=Tc06v2_t016530.1|organism=Theobroma cacao|type=mRNA|length=1761bp
ATGGAATCGTCGGAGGTGAATATGTCGAGAGACTCGTCCGAGTTGGACGA
GTCCGCTCGGGGATCCTCATCACCCGACCTAGCGCTCGAGCGAGTTCTAT
CTCTTTTGAAATCTCACAGGGACAGGAGCTCCGTTTCTCTGGTCTGCAAG
GACTGGTACAACGCGGAACGGTGGTCGAGGACTCACGTTTTCATCGGAAA
CTGTTACTCCGTCTCGCCGGAGATCGTCGCACGGCGGTTCCCGAAAATCC
GGAGCGTGACGTTGAAAGGGAAGCCTAGGTTTTCCGACTTCAACTTGGTG
CCGCAGAACTGGGGGGCCGATATCCACCCTTGGCTGGTCGTTTTCGCCGC
TAAATATCCGTTCCTCGAAGAGCTCAGGCTTAAGCGAATGACAATCAGCG
ACGAAAGCTTGGAGTTTTTAGCCGTTTCTTTTCCCAACTTCAAAGCTCTC
TCGCTTTTAAGCTGCGACGGTTTTAGCACTGACGGACTCGCCATCATTGC
CACTCATTGCAAGAACTTGACTGAGCTGGACATACAGGAGAATGGCATTG
ATGATAAAGGAGGTAGTTGGTTGAGCTGCTTCCCTGAAAGCTTCACATCA
TTGGAAGCACTGAACTTTGCCAACTTGACCAGTGATATTAATTTCGATGC
TCTTGAGAGGCTTGTAGGTAGGTGCAAGTCAATGAGGGTTTTAAAGGTCA
ACAGGAGCATATCCTTGGAACAATTACAAAGACTTCTTGTTAATGCTCTT
CAATTGGCCGAGCTTGGTACAGGCTCATTCTCACAAGAACTTACTTTCCG
CCAATATGAAGAGCTTGAAAGCACATTAAGTAGCTCCAAGAATATTCATA
CACTATCTGGTTTGTGGGAGGCCAAGGGCTTACATCTCCCTGCTTTATAC
CCTGTGTGCACACATCTGACTTTCTTGAGCTTGAGCTATGCTCCTTTGCA
AAGTGGTGAACTCGCTAAGCTTCTTGCTCATTGTCCACAACTTCGACGCC
TCTGGGTCTTGGACACAGTAGAAGACGAAGGACTGGAAGCCGTTGGATCG
AGCTGCCCTTTGCTTGAAGAACTTAGAGTTTTCCCTGCTGATCCCTTTGA
TGAGGATATTATCCATGGAGTCACTGAAGCTGGGTTTGTTGCTGTGTCTT
ATGGTTGCCCAAGACTCCACTATGTCCTCTATTTTTGTCGGCAGATGACT
AATGCAGCTGTAGCAACCATTGTACAGAACTGCCCTGATTTTACGCATTT
CCGATTATGCATAATGGACCCAGGTCAACCAGATTATCTCACAAATGAAC
CCATGGATGAAGCTTTTGGTGCAGTGGTTAAGACATGCACTAAACTCCAG
AGGCTTTCAGTTTCAGGTCTCTTAACCGATCTGACATTTGAGTATATTGG
AAGGTATGCGAAGAACTTGGAGACCCTTTCAGTGGCTTTTGCAGGCAGCA
GTGACTGGGGGATGCAGTGTGTTCTGACAGGTTGTCCGAAACTAAGGAAA
CTTGAGATAAGAGACTGCCCATTTGGCAATGCAGCACTGCTGTCAGGTTT
GGACAAGTATGAGTCCATGAGGTCACTTTGGATGTCAGCCTGCCATGTGA
CAATGGATGGCTGCAGGCAATTGGCAAGGGAGATGCCCAGATTGAATGTT
GAGGTAATGAAGGAGGATGGAAGTGATGATAGTGAAGCTGATAAAGTCTA
TGTTTATCGTTCTATTGCAGGCCCAAGGAGGGATGCCCCACCATTTGTGC
TTACTCTCTGA back to topprotein sequence of Tc06v2_p016530.1 >Tc06v2_p016530.1 ID=Tc06v2_p016530.1|Name=Tc06v2_p016530.1|organism=Theobroma cacao|type=polypeptide|length=587bp
MESSEVNMSRDSSELDESARGSSSPDLALERVLSLLKSHRDRSSVSLVCK
DWYNAERWSRTHVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLV
PQNWGADIHPWLVVFAAKYPFLEELRLKRMTISDESLEFLAVSFPNFKAL
SLLSCDGFSTDGLAIIATHCKNLTELDIQENGIDDKGGSWLSCFPESFTS
LEALNFANLTSDINFDALERLVGRCKSMRVLKVNRSISLEQLQRLLVNAL
QLAELGTGSFSQELTFRQYEELESTLSSSKNIHTLSGLWEAKGLHLPALY
PVCTHLTFLSLSYAPLQSGELAKLLAHCPQLRRLWVLDTVEDEGLEAVGS
SCPLLEELRVFPADPFDEDIIHGVTEAGFVAVSYGCPRLHYVLYFCRQMT
NAAVATIVQNCPDFTHFRLCIMDPGQPDYLTNEPMDEAFGAVVKTCTKLQ
RLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLTGCPKLRK
LEIRDCPFGNAALLSGLDKYESMRSLWMSACHVTMDGCRQLAREMPRLNV
EVMKEDGSDDSEADKVYVYRSIAGPRRDAPPFVLTL* back to top
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