Tc06v2_t009020.1

Overview
NameTc06v2_t009020.1
Unique NameTc06v2_t009020.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length840
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Productinorganic pyrophosphatase 2
NoteInorganic pyrophosphatase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596127
GenbankXM_007024408.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g009020Tc06v2_g009020Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p009020.1Tc06v2_p009020.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto329967auto329967Theobroma cacaoexon
exon-auto329968auto329968Theobroma cacaoexon
exon-auto329969auto329969Theobroma cacaoexon
exon-auto329970auto329970Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto329971auto329971Theobroma cacaoCDS
CDS-auto329972auto329972Theobroma cacaoCDS
CDS-auto329973auto329973Theobroma cacaoCDS
CDS-auto329974auto329974Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t009020.1 ID=Tc06v2_t009020.1|Name=Tc06v2_t009020.1|organism=Theobroma cacao|type=mRNA|length=840bp
ATGGTTGACATAGTTGTGATTTTCGATTTCGATAAAACGATTATCGATTG
TGATAGTGATAACTGGGTGTTGGATGAATTGGGTGCTACAAAGTTGTTCA
ACCAACTCCTTCCGACCATGCCTTGGAACCCTCTTATGGATCGAATGATG
AAAGAACTTCATTCACAAGGAACAAAAATTGAGGACATTAAAGCTGTTCT
TAAAAGGACCCCGATACATCCTCGAATCATCCAGGCCATTAAATCGGCTT
ATGCTTTGGGATGTGATTTGAAGATTGTAAGCGATGCTAACGCGTTCTTC
ATTGAGACAATCTTGAAACATCATGGCCTGAGGGAATACTTTTCAGAGAT
CAATACAAACCCGGGTTTCGTTGATGAAGAAGGCAGGCTACGTATCTTCC
CTCATCATGATTTCACTCAATCTCCCCATGGATGTCATCATCCCTGCCCT
CCAAATATGTGCAAGGGTACTGTGATTGAAAGGATTCAAGCTTCCATGTC
CATGAAGGGGAAGAAAACAATAATTTACCTTGGTGATGGGGTTGGTGATT
TCTGCCCGAGTTTGAAGCTTGGAGATGGAGACTACGTAATGCCAAGGAAG
AATTTCCCTGTTTGGGACTTGATATGCGAAAACAGGAGGTTAATAAAGGC
AGAAATATGCGAATGGAGCAATGGAGAGGAGTTTGAGCATGTGTTACTCC
ACGTTATCAACAGGATTTCCATTGATAGAAACAACAGTGACAATACTGCT
CGGCTGTATTCGATTGATTGCAAACTCCAAACACTGCCAGGCGCTGCTCA
AGAAAAAGCCTTCTCCCATGCCCTTTATGTTCCTCATTAG
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protein sequence of Tc06v2_p009020.1

>Tc06v2_p009020.1 ID=Tc06v2_p009020.1|Name=Tc06v2_p009020.1|organism=Theobroma cacao|type=polypeptide|length=280bp
MVDIVVIFDFDKTIIDCDSDNWVLDELGATKLFNQLLPTMPWNPLMDRMM
KELHSQGTKIEDIKAVLKRTPIHPRIIQAIKSAYALGCDLKIVSDANAFF
IETILKHHGLREYFSEINTNPGFVDEEGRLRIFPHHDFTQSPHGCHHPCP
PNMCKGTVIERIQASMSMKGKKTIIYLGDGVGDFCPSLKLGDGDYVMPRK
NFPVWDLICENRRLIKAEICEWSNGEEFEHVLLHVINRISIDRNNSDNTA
RLYSIDCKLQTLPGAAQEKAFSHALYVPH*
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