Tc06v2_t008880.1

Overview
NameTc06v2_t008880.1
Unique NameTc06v2_t008880.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length843
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Productinorganic pyrophosphatase 2
NoteInorganic pyrophosphatase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596110
GenbankXM_018122973.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g008880Tc06v2_g008880Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p008880.1Tc06v2_p008880.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto329661auto329661Theobroma cacaoexon
exon-auto329662auto329662Theobroma cacaoexon
exon-auto329663auto329663Theobroma cacaoexon
exon-auto329664auto329664Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto329665auto329665Theobroma cacaoCDS
CDS-auto329666auto329666Theobroma cacaoCDS
CDS-auto329667auto329667Theobroma cacaoCDS
CDS-auto329668auto329668Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t008880.1 ID=Tc06v2_t008880.1|Name=Tc06v2_t008880.1|organism=Theobroma cacao|type=mRNA|length=843bp
ATGGTTGATATAGTTGTGATTTTCGATTTCGATAAAACGATTATCGATTG
TGATAGTGATAACTGGGTGTTGGATGAATTGGGTGCTACAAAGTTGTTCA
ACCAACTCCTTCCTACCATGCCTTGGAACCCTCTTATGGATCGAATGATG
AAAGAACTTCATTCACAAGGAACAAAAATTGAGGACATTAAAGCTGTTCT
TAAAAGGACCCCGATACATCCTCGAATCATCCAGGCCATTAAATCGGCTT
ATGCTTTGGGATGTGATTTGAAGATTGTAAGCGATGCTAACGCGTTCTTC
ATTGAGACAATCTTGAAACATCATGGCCTGAGGGAATACTTTTCAGAGAT
CAATACAAACCCGGGTTTCGTTGATGAAGAAGGCAGGCTACGTATCTTCC
CTCATCATGATTTCACTCAATCTCCCCATGGATGTCATCATCCCTGCCCT
CCAAATATGTGCAAGGGTACTGTGATTGAAAGGATTCAAGCTTCTATGTC
CACGGAGGGGAAGAAAACAATAATTTACCTTGGTGATGGGGTTGGTGATT
TCTGCCCGAGTTTGAAGCTTGGAGACGGAGACTACGTAATGCCAAGGAAG
AATTTCCCTGTTTGGGACTTGATATGCGAAAACAGGAGGCTAATAAAGGC
AGAAGTATGCGAATGGAGCAATGGAGATGAGTTTGAGCATGTGTTGCTCC
ATCTTATCAGCAGGATTTCCATTGACAGAAACAACAGTGGCAATAGTACT
GCTCAGCTGTATTCAGTTGACTGCAAACCCCAAACAATGCCAGGCGCTGC
CCATGAAAAACCCTTCTTCCATGCCCTTTATGTTTCTCATTAG
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protein sequence of Tc06v2_p008880.1

>Tc06v2_p008880.1 ID=Tc06v2_p008880.1|Name=Tc06v2_p008880.1|organism=Theobroma cacao|type=polypeptide|length=281bp
MVDIVVIFDFDKTIIDCDSDNWVLDELGATKLFNQLLPTMPWNPLMDRMM
KELHSQGTKIEDIKAVLKRTPIHPRIIQAIKSAYALGCDLKIVSDANAFF
IETILKHHGLREYFSEINTNPGFVDEEGRLRIFPHHDFTQSPHGCHHPCP
PNMCKGTVIERIQASMSTEGKKTIIYLGDGVGDFCPSLKLGDGDYVMPRK
NFPVWDLICENRRLIKAEVCEWSNGDEFEHVLLHLISRISIDRNNSGNST
AQLYSVDCKPQTMPGAAHEKPFFHALYVSH*
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