Tc06v2_t008240.2

Overview
NameTc06v2_t008240.2
Unique NameTc06v2_t008240.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1062
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productauxin-responsive protein IAA26, transcript variant X1
NotePutative Auxin-responsive protein IAA6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596026
GenbankXM_007024257.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g008240Tc06v2_g008240Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p008240.2Tc06v2_p008240.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto328245auto328245Theobroma cacaoexon
exon-auto328246auto328246Theobroma cacaoexon
exon-auto328247auto328247Theobroma cacaoexon
exon-auto328248auto328248Theobroma cacaoexon
exon-auto328249auto328249Theobroma cacaoexon
exon-auto328250auto328250Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto328251auto328251Theobroma cacaoCDS
CDS-auto328252auto328252Theobroma cacaoCDS
CDS-auto328253auto328253Theobroma cacaoCDS
CDS-auto328254auto328254Theobroma cacaoCDS
CDS-auto328255auto328255Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t008240.2 ID=Tc06v2_t008240.2|Name=Tc06v2_t008240.2|organism=Theobroma cacao|type=mRNA|length=1062bp
ATGGAGAGCGGTTGCTCGAAGAATGTTGAAGCATGCCCTCAACTTCTTGA
TTTGATTCCTCAACAACGACGGTGGCATATGAAGAGAGAAGATGAGAGAA
GGCATGGATCCTCAGAGGAGAAGAAGCTGGAACTGAGGCTTGGACCCCCA
GGTGAAGATAACTGGTCCATCAAAATAGACGCCACCAAAAGCAACAACAA
AGAAAGAGATGAGTCTTTGCTCTCACTCGGGTACTTCCCTTCAATGAACA
GCAATGCAAAACAGACGCATACATTTCCAACTCCAGAGGACCACCCGGTT
GGGTCTGTTTTATCCTCTCCATGGGCAAATACCCAGCAGCATAACCATCA
ACAGCAGACAAAGCCTCCTTCATTTCTTCAGTTCTCATCAACAGCCCCAC
AGACCTTGCCTGTTATAGCAAAGGAATCGTCACAGCCCTGTTGCACTAAA
GCGGTAGATTTGCATAATGCAGAGAAAACAGCATTCTCACTGCCTCCTGC
AAATACATCTGTGCCTCCCAACAGTTCTCAGAAAAGAACTGCCCCTGGTC
CAGTTGTGGGTTGGCCTCCAATTCGCTCTTTTAGGAAAAATCTTGCAAGC
AGCAGCTCTTCAAAACTAGCTTCTGAATCACCAAGTGTGGTCCCTCACAA
GGTTGCTAATGAAAAAGCAGCAACTGAACCTACTGGTAAAGGCCTATTTG
TGAAAATCAACATGGATGGAGTTCCCATCGGAAGGAAAGTGGATCTCAGA
GCCTATGACAGCTATGAAAAACTGTCAACTGCTGTTGATGAACTCTTCAG
AGGCCTCCTTGCAGCTCAAAGAGATTCCTGTGCTGGTGGAATAGTGAGCA
AGCAGGAGGAAGAGAAAGTGATTACAGGCGTATTGGACGGAAGTGGGGAA
TATACACTTGTTTATGAGGATAACGAAGGAGACAGGATGCTTGTTGGGGA
TGTCCCGTGGCACATGTTTGTATCAACAGTGAAGAGGCTGCGCGTGTTGA
AGAGCTCCGAACTATCTGCGCTTAGCCTCGGAAGCAGTAAGCAGGGAAAG
ATGCCTGCTTGA
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protein sequence of Tc06v2_p008240.2

>Tc06v2_p008240.2 ID=Tc06v2_p008240.2|Name=Tc06v2_p008240.2|organism=Theobroma cacao|type=polypeptide|length=354bp
MESGCSKNVEACPQLLDLIPQQRRWHMKREDERRHGSSEEKKLELRLGPP
GEDNWSIKIDATKSNNKERDESLLSLGYFPSMNSNAKQTHTFPTPEDHPV
GSVLSSPWANTQQHNHQQQTKPPSFLQFSSTAPQTLPVIAKESSQPCCTK
AVDLHNAEKTAFSLPPANTSVPPNSSQKRTAPGPVVGWPPIRSFRKNLAS
SSSSKLASESPSVVPHKVANEKAATEPTGKGLFVKINMDGVPIGRKVDLR
AYDSYEKLSTAVDELFRGLLAAQRDSCAGGIVSKQEEEKVITGVLDGSGE
YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSALSLGSSKQGK
MPA*
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