Tc05v2_t024710.1

Overview
NameTc05v2_t024710.1
Unique NameTc05v2_t024710.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1035
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productgibberellin receptor GID1C
NoteGibberellin receptor GID1C
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600326
GenbankXM_007030695.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g024710Tc05v2_g024710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p024710.1Tc05v2_p024710.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto303876auto303876Theobroma cacaoexon
exon-auto303877auto303877Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto303878auto303878Theobroma cacaoCDS
CDS-auto303879auto303879Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t024710.1 ID=Tc05v2_t024710.1|Name=Tc05v2_t024710.1|organism=Theobroma cacao|type=mRNA|length=1035bp
ATGGCTGGAAGTAATGAAGTCAACCTCAATGAGTGCAAGATGGTGGTTCC
CCTAAATACATGGGTCCTCATCTCCACTTATAAGTTGGCTTACAATCTTC
TTCGTCGACCTGATGGCACTTTCAAACGTCACTTGGCAGAGTTTCTTGAT
CGGAAAGTCCCTGCTAATGCGAACCCAGTTGATGGGGTTTTCTCATTTGA
TGTCATCATTGATCGTAGCACGAGCCTTTTTAGTCGGATTTATAGACCAG
CTACTGCTGAAGAGCCTCAGCCAAACATTGTTGAGCTTGAGAAGCCTGTT
ATGGCTGAGGTTGTCCCTGTTATAATTTTCTTTCATGGTGGAAGCTTTGC
ACATTCCTCGGCAAATAGTGCTATATATGACACTCTTTGTCGCCGATTGG
TAGGTGTTTGTAAGGCTGTTGTGGTCTCTGTGAATTATCGGCGTGCACCT
GAAAATAGATATCCAAGTGCTTATGATGATGGGTGGACTGCTCTTAAGTG
GGTTAACTCTAGATCATGGCTTCAAAGCCAGAAAGATTCAAAGGTTCATA
TATATTTGGCTGGGGATAGCTCTGGTGGTAACATTGCACACCATGTCGCA
GCTCAAGCTGTAGAATCAGGAATTGATGTATTGGGAAATATATTACTCAA
TCCAATGTTTGGTGGACAAGAAAGAACTGAATCTGAAAAGCGTTTAGATG
GGAAATATTTTGTTACTCTGCAAGACCGGGACTGGTACTGGAGAGCTTTT
CTCCCTGAAGGAGAAGACAGGGATCATCCTGCATGTAATCCATTTGGTCC
TAATGGTAAGAGTCTTGAAGGAATCAAATTTCCAAAGAGTCTGGTAGTGG
TTGCTGGCTTGGACCTTGTTCAGGATTGGCAAATGGCTTATGTTGAAGGG
CTCAAAAACGCTGGCCAAGAGGTTAAACTTTTATATTTGGACCAGGCAAC
AATTGGTTTCTACTTGTTACCGAACAACAACCACTTCCATACTGTTATGG
GCGAGATAAGTAAATTTGTGAGTTCTAACTGTTAA
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protein sequence of Tc05v2_p024710.1

>Tc05v2_p024710.1 ID=Tc05v2_p024710.1|Name=Tc05v2_p024710.1|organism=Theobroma cacao|type=polypeptide|length=345bp
MAGSNEVNLNECKMVVPLNTWVLISTYKLAYNLLRRPDGTFKRHLAEFLD
RKVPANANPVDGVFSFDVIIDRSTSLFSRIYRPATAEEPQPNIVELEKPV
MAEVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGVCKAVVVSVNYRRAP
ENRYPSAYDDGWTALKWVNSRSWLQSQKDSKVHIYLAGDSSGGNIAHHVA
AQAVESGIDVLGNILLNPMFGGQERTESEKRLDGKYFVTLQDRDWYWRAF
LPEGEDRDHPACNPFGPNGKSLEGIKFPKSLVVVAGLDLVQDWQMAYVEG
LKNAGQEVKLLYLDQATIGFYLLPNNNHFHTVMGEISKFVSSNC*
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