Tc05v2_t024590.1

Overview
NameTc05v2_t024590.1
Unique NameTc05v2_t024590.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length627
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productadenylyl-sulfate kinase 3
NoteAdenylyl-sulfate kinase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600301
GenbankXM_007030666.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g024590Tc05v2_g024590Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p024590.1Tc05v2_p024590.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto303365auto303365Theobroma cacaoexon
exon-auto303366auto303366Theobroma cacaoexon
exon-auto303367auto303367Theobroma cacaoexon
exon-auto303368auto303368Theobroma cacaoexon
exon-auto303369auto303369Theobroma cacaoexon
exon-auto303370auto303370Theobroma cacaoexon
exon-auto303371auto303371Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto303372auto303372Theobroma cacaoCDS
CDS-auto303373auto303373Theobroma cacaoCDS
CDS-auto303374auto303374Theobroma cacaoCDS
CDS-auto303375auto303375Theobroma cacaoCDS
CDS-auto303376auto303376Theobroma cacaoCDS
CDS-auto303377auto303377Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t024590.1 ID=Tc05v2_t024590.1|Name=Tc05v2_t024590.1|organism=Theobroma cacao|type=mRNA|length=627bp
ATGTCTACTATGGGAAATTCAACAAATATATTTTGGCAAGAATCACCAAT
TGGGAAGCTTGAAAGGCAGAAGCTGCTTAACCAAAAGGGTTGTGTTGTAT
GGATTACGGGTCTCAGTGGATCAGGAAAAAGCACACTTGCGTGTTCACTA
AGTAGAGAATTGTATACAAGGGGAAAGCTATCTTACATACTTGATGGTGA
TAACCTTCGGCATGGACTAAATAAGGATCTTGGTTTCAAGGCAGACGATC
GAACAGAAAATATACGTAGGGTTGGGGAAGTGGCAAAGCTCTTTGCAGAC
GCTGGTTTAATCTGCATTGCCAGTTTAATATCTCCGTATAGGAAAGACCG
GGATGCATGCCGTGCTATGTTGCCTGATGCTAATTTTATAGAGGTTTTCA
TGAACATGCCTCTGGAATTGTGTGAGGCAAGAGATTCAAAAGGCCTTTAC
AAGCTTGCACGTGCTGGAAAGATTAAAGGTTTTACTGGCATAGATGATCC
TTATGAGCCACCCCTGAACTGTGAGATAGAAATACAGCAGAAAGATGGAG
ATTGCCCCACACCAGGTGCTATGGCAGGGGAAGTAGTTTCTTACTTGGAA
GAGAAAGGGTATCTGCGAGATCATTAA
back to top

protein sequence of Tc05v2_p024590.1

>Tc05v2_p024590.1 ID=Tc05v2_p024590.1|Name=Tc05v2_p024590.1|organism=Theobroma cacao|type=polypeptide|length=209bp
MSTMGNSTNIFWQESPIGKLERQKLLNQKGCVVWITGLSGSGKSTLACSL
SRELYTRGKLSYILDGDNLRHGLNKDLGFKADDRTENIRRVGEVAKLFAD
AGLICIASLISPYRKDRDACRAMLPDANFIEVFMNMPLELCEARDSKGLY
KLARAGKIKGFTGIDDPYEPPLNCEIEIQQKDGDCPTPGAMAGEVVSYLE
EKGYLRDH*
back to top