Tc05v2_t022810.1

Overview
NameTc05v2_t022810.1
Unique NameTc05v2_t022810.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length684
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productethylene-responsive transcription factor 1B
NotePutative Ethylene-responsive transcription factor 1B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18600105
GenbankXM_018121250.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g022810Tc05v2_g022810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p022810.1Tc05v2_p022810.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto300202auto300202Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto300203auto300203Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t022810.1 ID=Tc05v2_t022810.1|Name=Tc05v2_t022810.1|organism=Theobroma cacao|type=mRNA|length=684bp
ATGGATTCTTCATTCTTTCAATACCCAAATCTTCAATTCTCTCCTGCTCA
ATCCTCTTCTTCCTATGTTTCTCAAGAAAACTTCTCACCAGAGTACTTCA
ATTACCAAAACCAAGCCCTTCCTTTCAATGAAAATGACTCCCAAGAAATG
CTTCTTCTAGGAGTTCTAAACCAAGCCCCGGCAAACTACTTTGATACCAC
ATCTGTTAATAGTTTCGGAGATGATAATGAAGTGAATTCGCAAGCTAACG
AAGAGGAGACAGGAAAGGAGATTTCTTACAGAGGAGTTAGGAAGAGGCCA
TGGGGAAAATATGCAGCTGAGATTAGGGATTCCACAAGGAATGGTGTTAG
AGTTTGGCTTGGAACCTTTGATACAGCTGAGGCTGCAGCTTTAGCCTATG
ATCAGGCTGCATTGGCAATGCGAGGTCCAATGGCTATACTCAATTTTCCA
ATGGATAAAGTTTATGAATCACTTCAAGAAATGAACTATGGGTTTGAAGA
AGGTTATTCACCTGTTTTGACAATGAAGAAAAGGTACTCGATGAAGGCCA
AAAGATCAGGGAGCAAGAAGAAGAAAGAGAAGGAAATGGGGATGGAAAAT
ATCCTGGTGTTGGAGGATTTAGGAGCTGATTATTTGGAGGAGCTTCTAAG
TATATCTGAGAGTAGTGCAACTCCTTATTGGTGA
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protein sequence of Tc05v2_p022810.1

>Tc05v2_p022810.1 ID=Tc05v2_p022810.1|Name=Tc05v2_p022810.1|organism=Theobroma cacao|type=polypeptide|length=228bp
MDSSFFQYPNLQFSPAQSSSSYVSQENFSPEYFNYQNQALPFNENDSQEM
LLLGVLNQAPANYFDTTSVNSFGDDNEVNSQANEEETGKEISYRGVRKRP
WGKYAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAALAMRGPMAILNFP
MDKVYESLQEMNYGFEEGYSPVLTMKKRYSMKAKRSGSKKKKEKEMGMEN
ILVLEDLGADYLEELLSISESSATPYW*
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