Tc05v2_t021370.4

Overview
NameTc05v2_t021370.4
Unique NameTc05v2_t021370.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length324
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productuncharacterized LOC18599921, transcript variant X4
NoteUncharacterized protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599921
GenbankXM_018120524.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g021370Tc05v2_g021370Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p021370.4Tc05v2_p021370.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto296477auto296477Theobroma cacaoexon
exon-auto296478auto296478Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto296479auto296479Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t021370.4 ID=Tc05v2_t021370.4|Name=Tc05v2_t021370.4|organism=Theobroma cacao|type=mRNA|length=324bp
ATGAGAGTGAGACTGGCAAAGAAGAGAAGGGCTATCAGGCGTATGAGACA
GTCGCTAAGTGCTTCGCAAATCGCAGCTGAACAGATTGAGCGAGACCACG
AGCGGATGTTTGCAGCTGAACAGATTGAGCGACGGAACCGGCGAATTATT
GCAGAGAATGCTCTCATTGATCAATTGGTTTACGATCTTCTGGCTGAGCT
TGAAAACGATCCTTTAATCAGGAGCGCTGCTGAAGCAATCCGTGCTGAGA
ATCTTGATGGAAGGAACATTATTATAAACCAAGCTCCACCTCCCGGCGGC
GGCCGCCCGCGGCGGCGCCGATGA
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protein sequence of Tc05v2_p021370.4

>Tc05v2_p021370.4 ID=Tc05v2_p021370.4|Name=Tc05v2_p021370.4|organism=Theobroma cacao|type=polypeptide|length=108bp
MRVRLAKKRRAIRRMRQSLSASQIAAEQIERDHERMFAAEQIERRNRRII
AENALIDQLVYDLLAELENDPLIRSAAEAIRAENLDGRNIIINQAPPPGG
GRPRRRR*
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