Tc05v2_t021370.2

Overview
NameTc05v2_t021370.2
Unique NameTc05v2_t021370.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length393
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productuncharacterized LOC18599921, transcript variant X3
NoteUncharacterized protein isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599921
GenbankXM_018120523.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g021370Tc05v2_g021370Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p021370.2Tc05v2_p021370.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto296463auto296463Theobroma cacaoexon
exon-auto296464auto296464Theobroma cacaoexon
exon-auto296465auto296465Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto296466auto296466Theobroma cacaoCDS
CDS-auto296467auto296467Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t021370.2 ID=Tc05v2_t021370.2|Name=Tc05v2_t021370.2|organism=Theobroma cacao|type=mRNA|length=393bp
ATGGCCCTTTTTTTCTTTCACCGTTTTGGACTGAATCGCTATCAAAACAT
GGGCCGTCGCTTGAGGGCTATGAGAGTGAGACTGGCAAAGAAGAGAAGGG
CTATCAGGCGTATGAGACAGTCGCTAAGTGCTTCGCAAATCGCAGCTGAA
CAGATTGAGCGAGACCACGAGCGGATGTTTGCAGCTGAACAGATTGAGCG
ACGGAACCGGCGAATTATTGCAGAGAATGCTCTCATTGATCAATTGGTTT
ACGATCTTCTGGCTGAGCTTGAAAACGATCCTTTAATCAGGAGCGCTGCT
GAAGCAATCCGTGCTGAGAATCTTGATGGAAGGAACATTATTATAAACCA
AGCTCCACCTCCCGGCGGCGGCCGCCCGCGGCGGCGCCGATGA
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protein sequence of Tc05v2_p021370.2

>Tc05v2_p021370.2 ID=Tc05v2_p021370.2|Name=Tc05v2_p021370.2|organism=Theobroma cacao|type=polypeptide|length=131bp
MALFFFHRFGLNRYQNMGRRLRAMRVRLAKKRRAIRRMRQSLSASQIAAE
QIERDHERMFAAEQIERRNRRIIAENALIDQLVYDLLAELENDPLIRSAA
EAIRAENLDGRNIIINQAPPPGGGRPRRRR*
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