Tc05v2_t017570.1

Overview
NameTc05v2_t017570.1
Unique NameTc05v2_t017570.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1359
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productanthocyanidin 3-O-glucosyltransferase 2
NoteAnthocyanidin 3-O-glucosyltransferase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599494
GenbankXM_018121566.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g017570Tc05v2_g017570Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p017570.1Tc05v2_p017570.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto288966auto288966Theobroma cacaoexon
exon-auto288967auto288967Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto288968auto288968Theobroma cacaoCDS
CDS-auto288969auto288969Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t017570.1 ID=Tc05v2_t017570.1|Name=Tc05v2_t017570.1|organism=Theobroma cacao|type=mRNA|length=1359bp
ATGCCTCGGCTCACCCATTCTGACGCCCATGTTGCTGTCCTTGCCTTCCC
CTTCTCCACCCACGCTGCTCCACTCCTCACCATCATCAACCGCCTAGCCG
CTGCTTCCCCAGCCACTTTGTTCTCCTTCTTCAGCACTGCACAATCCAAC
AACTCTATCTTCTCCACCACGTCTCAACAAACGAAACCAAACATTAAAGC
CTATAACGTACCAGATGGAGTGCCGGATGGTTACGTGTTTGTTGGGAAGC
CTCATGAGGATATTGAGTTGTTCATGGAAGTGGCACCGGAGAACTTAAGG
AAGGGAATGGAAGTGGCCGTGGCAGAGACGGGGAGGAAAGTGAGCTGCTT
GGTTACTGATGCTTTCTTTTGGTTTGCCAAAGAGATGGCAGAGGAGAACG
GTGTGCCTTGGGTACCCTTTTTTGTTTCAGGAGCTTGCCCCCTTTCTTCC
CATCTTTATACTGATACCATAAGGCAAAACTTTGGAGTTGGAGGCATGGT
TGGGCGAGAAGATGAGACCCTCGACTTCATTCCTGGAATGTCTAATATAC
GCATCCGTGACTTGCCTGAAGGAATCCTCTTTGGAAATCTGGAATCAATC
TTCTCTCGCATGGTGCATCGAATGGGGCAAGTGCTACCTGAGGCAGCTGC
AGTCTTCATAAGCTCCTTTGAAGAACTAGACCCTGTGGTTACAAGTGATA
TGAAATCCAAGCTCAAGAAATTCTTAAATGTTGGACCTTTGACCCTTTCA
ACACCACCAGCACCAGCAGTTCCAGATTCTTATGGTTGCCTGACATGGCT
TGACAAGCAAAAGCCCGCAACAGTGGCATATATTAGCTTTGGCTCGGTCG
CAACGCCACCGCCAAATGAACTTGTAGCACTAGCAGAAGCATTAGAAGCT
AGCATGGTTCCTTTCATATGGTCTTTAAGAGACAAATCGAAGGTACATTT
GCCTAATGGGTTCTTAGACAGGGCCAATGGCATATTGGTGCCATGGGCTC
CCCAAATAGATGTGCTAGCTCATGGTGCTGTTGGGGTGTTCATAAGCCAT
GGTGGTTATAACTCCATGCAAGAGAGCATGTCAAGTGGGGTGCCTATGAT
TGTCAGGCCATTTTTTGGGGACCATGGGCTCAACGGACGAATGGTAGAGC
ACGTTTGGGAGATTGGTGTGATTGTTGAGGGTGGAATTTTCACGAAGAAG
TGCGTCACGAGTTGTTTGGATCTAGTTTTAGCACAAGAGAAGGGGAAGAA
AATGAGGGAGAATTTGAAGGCACTCAAGGAACTTGCACATAGAGCAGTTG
GACCAGAAGGTAGCTCCACTAAAAATTTCAAGGCATTGTTGGATTTTGTA
TGTAGCTAG
back to top

protein sequence of Tc05v2_p017570.1

>Tc05v2_p017570.1 ID=Tc05v2_p017570.1|Name=Tc05v2_p017570.1|organism=Theobroma cacao|type=polypeptide|length=453bp
MPRLTHSDAHVAVLAFPFSTHAAPLLTIINRLAAASPATLFSFFSTAQSN
NSIFSTTSQQTKPNIKAYNVPDGVPDGYVFVGKPHEDIELFMEVAPENLR
KGMEVAVAETGRKVSCLVTDAFFWFAKEMAEENGVPWVPFFVSGACPLSS
HLYTDTIRQNFGVGGMVGREDETLDFIPGMSNIRIRDLPEGILFGNLESI
FSRMVHRMGQVLPEAAAVFISSFEELDPVVTSDMKSKLKKFLNVGPLTLS
TPPAPAVPDSYGCLTWLDKQKPATVAYISFGSVATPPPNELVALAEALEA
SMVPFIWSLRDKSKVHLPNGFLDRANGILVPWAPQIDVLAHGAVGVFISH
GGYNSMQESMSSGVPMIVRPFFGDHGLNGRMVEHVWEIGVIVEGGIFTKK
CVTSCLDLVLAQEKGKKMRENLKALKELAHRAVGPEGSSTKNFKALLDFV
CS*
back to top