Tc05v2_t007560.2

Overview
NameTc05v2_t007560.2
Unique NameTc05v2_t007560.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1257
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productprotein ABSCISIC ACID-INSENSITIVE 5, transcript variant X3
NotePutative Protein ABSCISIC ACID-INSENSITIVE 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598227
GenbankXM_007027661.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g007560Tc05v2_g007560Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p007560.2Tc05v2_p007560.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto268501auto268501Theobroma cacaoexon
exon-auto268502auto268502Theobroma cacaoexon
exon-auto268503auto268503Theobroma cacaoexon
exon-auto268504auto268504Theobroma cacaoexon
exon-auto268505auto268505Theobroma cacaoexon
exon-auto268506auto268506Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto268507auto268507Theobroma cacaoCDS
CDS-auto268508auto268508Theobroma cacaoCDS
CDS-auto268509auto268509Theobroma cacaoCDS
CDS-auto268510auto268510Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t007560.2 ID=Tc05v2_t007560.2|Name=Tc05v2_t007560.2|organism=Theobroma cacao|type=mRNA|length=1257bp
ATGGTGATTACGGAATCTGAGATTGGCGAGGTTGAGTCATCGTTGCAGGT
GGATCAGCAGCAGAAGAACCACCCTTTCTCGTCCCTTGGAAGACAATCCT
CAATCTATTCCCTCACTCTTGATGAGTTCCAGCACACGGTATGTGAGGAT
GGGAAGAACTTCGGGTCCATGAACATGGACGAGTTCATTACCAGCATCTG
GAACGCTGAAGAAAACCAAGCTATCAACTCCAACATTTACAATCAGCAGA
GCAACTGTGCAAATAAACAAGTTAGCAGCTATGTTCATTTGTCGTTGAAT
GAAACAACAAGCAATAACGGCATAGCTAAGCAGCCTAGCCTGCCAAGGCA
AGGCTCGCTTACGCTTCCTGCACCTCTTTGTAGGAAGACTGTTGATGAAG
TTTGGTCTGAGATGCATCAAGGGCAGCAAGGACAAGGACAGAGCAACAAT
AGCAATGTAGAGAATGCTGAGAATGGAACCCGGCAGCCAACTTTTGGGGA
GATGACCTTGGAGGATTTCTTGATTAAGGCAGGGGTAAGGGAACAATGCA
TGCTACCAGCACCGCCTCCGCAGCACCAACCGCAATATGGGTTGTATCAG
AGTGGCAATAACGCTGCGGGGGGTCCAGGTTTTGTTTCCAGGCCCATTAT
GGGAGTGGATAGCAAAGGTGGCTTTGGTGGGAGTGCATACCAGACAATGC
CTCCAGGTGGAGTCATCGGTGATTCATCTGGGTATGTTAATGATTGTAAA
AGGGGTAGTGGCTATCAGCCAACTGCTCCGCCACCAACGACAGTTTGTTA
CAGTGGGAAGGTAGCTGCTGCTGGTGCCTATGTACGTGGACAGGCAATGG
GAGTGGTGTCACCAATGAGTCCAGTATCATCAGAAGGGATGTGTAACAGT
CAAGTTGATAATGCTGCTAATCATTTTGGGATGGATATGGGCGGACTAAG
GGGAAGGAAAAGGATCATTGAGGGTCCAATAGAGAAGGTAGTTGAGAGAA
GGCAACGCAGGATGATTAAGAATAGGGAGTCAGCTGCAAGGTCTAGAGCT
AGAAAACAGGCATATACAGTCGAGCTAGAAGCAGAATTGGACCAATTGAA
ACAAGAGAATGCCCATCTTAAGCAGGCTCTGGAAGAACTCGACAGGAAAA
GGAAGCAACAGTACTTTGAGGAAAGGAAAATGATAACACAAACCGAAGCC
CAAAAAGCTAAAGAGAAACTAAGAATAATAAGAAGAAATCTGAGTTGCCC
ATTGTAA
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protein sequence of Tc05v2_p007560.2

>Tc05v2_p007560.2 ID=Tc05v2_p007560.2|Name=Tc05v2_p007560.2|organism=Theobroma cacao|type=polypeptide|length=419bp
MVITESEIGEVESSLQVDQQQKNHPFSSLGRQSSIYSLTLDEFQHTVCED
GKNFGSMNMDEFITSIWNAEENQAINSNIYNQQSNCANKQVSSYVHLSLN
ETTSNNGIAKQPSLPRQGSLTLPAPLCRKTVDEVWSEMHQGQQGQGQSNN
SNVENAENGTRQPTFGEMTLEDFLIKAGVREQCMLPAPPPQHQPQYGLYQ
SGNNAAGGPGFVSRPIMGVDSKGGFGGSAYQTMPPGGVIGDSSGYVNDCK
RGSGYQPTAPPPTTVCYSGKVAAAGAYVRGQAMGVVSPMSPVSSEGMCNS
QVDNAANHFGMDMGGLRGRKRIIEGPIEKVVERRQRRMIKNRESAARSRA
RKQAYTVELEAELDQLKQENAHLKQALEELDRKRKQQYFEERKMITQTEA
QKAKEKLRIIRRNLSCPL*
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