Tc05v2_t007480.1

Overview
NameTc05v2_t007480.1
Unique NameTc05v2_t007480.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1167
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductCAAX prenyl protease 2
NoteCAAX prenyl protease 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598216
GenbankXM_007027647.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g007480Tc05v2_g007480Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p007480.1Tc05v2_p007480.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto268409auto268409Theobroma cacaoexon
exon-auto268410auto268410Theobroma cacaoexon
exon-auto268411auto268411Theobroma cacaoexon
exon-auto268412auto268412Theobroma cacaoexon
exon-auto268413auto268413Theobroma cacaoexon
exon-auto268414auto268414Theobroma cacaoexon
exon-auto268415auto268415Theobroma cacaoexon
exon-auto268416auto268416Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto268417auto268417Theobroma cacaoCDS
CDS-auto268418auto268418Theobroma cacaoCDS
CDS-auto268419auto268419Theobroma cacaoCDS
CDS-auto268420auto268420Theobroma cacaoCDS
CDS-auto268421auto268421Theobroma cacaoCDS
CDS-auto268422auto268422Theobroma cacaoCDS
CDS-auto268423auto268423Theobroma cacaoCDS
CDS-auto268424auto268424Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t007480.1 ID=Tc05v2_t007480.1|Name=Tc05v2_t007480.1|organism=Theobroma cacao|type=mRNA|length=1167bp
ATGGTAGGCAAAATGTCGTTAATCCGAGCCCGCGAGCTTCGCTGCAAAGT
TATCCAGACAAAAAGGTCCAAAATCCAAAAACCACCCAAGCAAGAATCGT
CAGATTCCGACCCACCCGTCCTCCCAAGGTCAAAACCCGAAACCATCGAA
CCGGAAGCAGTTGACATCTCCCATTCTCTCTTCCTCTCTCCCGCGCCCCA
GGCCGCCGCCCCCGGTAATCCAATCATGGAAGAGAACCAAGGGAGCTTAT
CGAAGCCAGTGGCGGTGATGGCCTGCATCACCATGACATTGTTTTACGTT
GCTATCCTTTATGCTCCTACTTTGATCCTCCGCCTTCCGCCACCCCAGTC
CTTTAAGAATTTCATGATCCGACGATTCGTTTGTGCCGCCGTTTCCTCCG
TCGCGTCCGTTATCTTCGTTCCTCTTATCCTCCCAATAAGGAGTCTGGAG
GCATCTTTTTTATTTGGGGTTTATGGCATTCGATCGGATCATCTTTGGCA
AGCGGTGGTCTTTCCTCTTTTCTTGACTTCTCTTATGTATGTTGGATCTT
TGACACTCAAGTCTATCTTATTGGTGAATAAATGGAAGCAGCATAGGAAT
CAAGATGGAAGGCCATTGTTCGATTGTATCAAAAGTACCGTCCTAAGCTT
CCCCAGCCAGATGTCATCAGTTGCTTCCAATGTTTTATTCTGGCGAAATT
TTGTTGTGGCGCCATTAACAGAGGAGTTGGTGTTTAGAGCATGTATGATT
CCTTTACTTCTTTGTGGGGGATTTAAAGCGTACAATGTCATTTTTGTCTG
CCCTACTTTCTTCAGTATAGCTCATTTGAACCATATGATGGAGATCTATA
GCCAGCAAAACTATAGCTTGCTTAAAGCCTCCATGGTTGTAGGTCTCCAG
CTGGGCTACACTGTGATCTTCGGTTCCTATGCTTCGTTTCTCTTCATTCG
AACAGGGAACCTTGTTGCTCCTTTAGTTGCCCATATATTTTGCAATTATA
TGGGATTGCCAGTTCTGTTTGTACAGAGGAAAGGGCTAGTTAGCATGGCA
TTTGTAGCTGGAATGATATCCTTTGCATGGCTTCTGTTTCCTATAACAAG
GCCTGATTTGTACAACAACAGAACAAATAATTGCAGATGTTGGCAAGGAT
ATTGTTCATGGAGTTAA
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protein sequence of Tc05v2_p007480.1

>Tc05v2_p007480.1 ID=Tc05v2_p007480.1|Name=Tc05v2_p007480.1|organism=Theobroma cacao|type=polypeptide|length=389bp
MVGKMSLIRARELRCKVIQTKRSKIQKPPKQESSDSDPPVLPRSKPETIE
PEAVDISHSLFLSPAPQAAAPGNPIMEENQGSLSKPVAVMACITMTLFYV
AILYAPTLILRLPPPQSFKNFMIRRFVCAAVSSVASVIFVPLILPIRSLE
ASFLFGVYGIRSDHLWQAVVFPLFLTSLMYVGSLTLKSILLVNKWKQHRN
QDGRPLFDCIKSTVLSFPSQMSSVASNVLFWRNFVVAPLTEELVFRACMI
PLLLCGGFKAYNVIFVCPTFFSIAHLNHMMEIYSQQNYSLLKASMVVGLQ
LGYTVIFGSYASFLFIRTGNLVAPLVAHIFCNYMGLPVLFVQRKGLVSMA
FVAGMISFAWLLFPITRPDLYNNRTNNCRCWQGYCSWS*
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