Tc05v2_t005730.1

Overview
NameTc05v2_t005730.1
Unique NameTc05v2_t005730.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length414
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Producthistidine--tRNA ligase, chloroplastic/mitochondrial-like
NoteHypothetical protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID108661850
GenbankXM_018120519.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g005730Tc05v2_g005730Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p005730.1Tc05v2_p005730.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto264450auto264450Theobroma cacaoexon
exon-auto264451auto264451Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto264452auto264452Theobroma cacaoCDS
CDS-auto264453auto264453Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t005730.1 ID=Tc05v2_t005730.1|Name=Tc05v2_t005730.1|organism=Theobroma cacao|type=mRNA|length=414bp
ATGGTTGATTTGCTTTTAAATATCTTTTATTTATGCTCTTTTGGCCTTTT
GGGTGTGCTTCTGTGGATGTGCTTGTGGCTATTTTGGCGATGTGGGGATT
GTGGTTCAAAGTTGCTCAAGGAAAAGGGGCTTCTACCAGAACTCAGCCTT
GAAGTAGACAACATTGTGTGTGCTCTGGATTATGATCTTCAAGGAGTAGC
TGCTACAGTTGCTACTAAACTCAGGGGAAAAGGCCAAAGTGTTGACTTGG
TCTTGGAGAGCAAACCGCTTAAATGGGTGTTCAAACGAGCTGCACGGGCA
AATGCAGAAAGACTAATATTGGTAGGAAATACTGAGTGGCAAAAGGGTAT
GGTTGGTGTAAAAATCCTTTCTTCTGGTGAACAATATGAGATTAAGCTGG
ATGAACTAGAGTGA
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protein sequence of Tc05v2_p005730.1

>Tc05v2_p005730.1 ID=Tc05v2_p005730.1|Name=Tc05v2_p005730.1|organism=Theobroma cacao|type=polypeptide|length=138bp
MVDLLLNIFYLCSFGLLGVLLWMCLWLFWRCGDCGSKLLKEKGLLPELSL
EVDNIVCALDYDLQGVAATVATKLRGKGQSVDLVLESKPLKWVFKRAARA
NAERLILVGNTEWQKGMVGVKILSSGEQYEIKLDELE*
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