Tc05v2_t005210.1

Overview
NameTc05v2_t005210.1
Unique NameTc05v2_t005210.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length513
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductV-type proton ATPase subunit G
NoteV-type proton ATPase subunit G
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597950
GenbankXM_007027264.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g005210Tc05v2_g005210Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p005210.1Tc05v2_p005210.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto263268auto263268Theobroma cacaoexon
exon-auto263269auto263269Theobroma cacaoexon
exon-auto263270auto263270Theobroma cacaoexon
exon-auto263271auto263271Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto263272auto263272Theobroma cacaoCDS
CDS-auto263273auto263273Theobroma cacaoCDS
CDS-auto263274auto263274Theobroma cacaoCDS
CDS-auto263275auto263275Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t005210.1 ID=Tc05v2_t005210.1|Name=Tc05v2_t005210.1|organism=Theobroma cacao|type=mRNA|length=513bp
ATGGAAGCATTACCAACCAATTATAAAAGCCCTCGTGGAAATCAAAACGA
CATGGTTTACCTCGGTTCCCGTTGTGATGCTAACAGTTTATTTTCCTCCC
TTGCATTAGTCAAACAAGCGTCCTTCAGTTTTGCACTGAAATCTTCAGAC
AAAAATCTAGACACTCTTTTCAAGGAAATCATGGAAGCCAGTCGGGGTCA
AGGTGGAATTCAGCAGTTGCTTGCTGCGGAACAAGAAGCTCAGCATATCG
TCAATGCCGCCAGAAATGCAAAGATGACTAGGCTGAAACAAGCCAAGGAA
GAGGCTGAAAAAGAGATTGCTGAACATCGAGCTCAAGCGGAGGAGGAGTT
CCAGAGGAAAGTTGCTGAGAGCAGTGGAGATTCAGGTGCTAATGTGAAGC
GGCTTGAGCAAGAGACAGAAGCAAAGATTCACCACCTGAACCTTGAGGCT
GCAAGAATATCAGATGATGTTGTCCAAATGCTTCTCAAGCATGTGACAAC
TGTGAAGAATTAA
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protein sequence of Tc05v2_p005210.1

>Tc05v2_p005210.1 ID=Tc05v2_p005210.1|Name=Tc05v2_p005210.1|organism=Theobroma cacao|type=polypeptide|length=171bp
MEALPTNYKSPRGNQNDMVYLGSRCDANSLFSSLALVKQASFSFALKSSD
KNLDTLFKEIMEASRGQGGIQQLLAAEQEAQHIVNAARNAKMTRLKQAKE
EAEKEIAEHRAQAEEEFQRKVAESSGDSGANVKRLEQETEAKIHHLNLEA
ARISDDVVQMLLKHVTTVKN*
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