Tc04v2_t018950.1

Overview
NameTc04v2_t018950.1
Unique NameTc04v2_t018950.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length444
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 13 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productferredoxin-1
NotePutative Ferredoxin-3, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602992
GenbankXM_007034701.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g018950Tc04v2_g018950Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p018950.1Tc04v2_p018950.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto237252auto237252Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto237253auto237253Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t018950.1 ID=Tc04v2_t018950.1|Name=Tc04v2_t018950.1|organism=Theobroma cacao|type=mRNA|length=444bp
ATGGCGACCCTTCATTTCACTCCATCCCCCTCCTTCATTCTCAACAAACC
AAGACCCACCACACTTGCTACCTCCCAGCTCAACCCCAGAGCCCGCCATG
GCTTTCTCAGATTCTCAACTGTCATTGCAAGGTCTTACAAAGTGGTGATA
GAGCATGAGGGTCAATCCACAGAGCTAGAGGTAGAGCCCGATGAAACCAT
TCTATCCAAGGCATTGGACTCTGGCTTGTTTGTGCCACATGACTGTAAGC
TTGGGGTGTGCATGACTTGCCCTGCTAAGCTCTTAAGCGGCGAGGTGGAT
CAGAGTGATGGCATGCTTAGTGATGATGTTATGGAGCGTGGATTTGCACT
GCTGTGTGCAGCTTATCCAAGATCAGATTGCCATATCAAGACAATTCCTG
AGGAAGAACTGCTGTCATTGCAGTTAGCAACAGCTAATGATTGA
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protein sequence of Tc04v2_p018950.1

>Tc04v2_p018950.1 ID=Tc04v2_p018950.1|Name=Tc04v2_p018950.1|organism=Theobroma cacao|type=polypeptide|length=148bp
MATLHFTPSPSFILNKPRPTTLATSQLNPRARHGFLRFSTVIARSYKVVI
EHEGQSTELEVEPDETILSKALDSGLFVPHDCKLGVCMTCPAKLLSGEVD
QSDGMLSDDVMERGFALLCAAYPRSDCHIKTIPEEELLSLQLATAND*
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