Tc04v2_t014170.1

Overview
NameTc04v2_t014170.1
Unique NameTc04v2_t014170.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length372
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productauxin-induced protein X15
NotePutative Auxin-induced protein 15A
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602460
GenbankXM_007033850.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g014170Tc04v2_g014170Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p014170.1Tc04v2_p014170.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto226342auto226342Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto226343auto226343Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t014170.1 ID=Tc04v2_t014170.1|Name=Tc04v2_t014170.1|organism=Theobroma cacao|type=mRNA|length=372bp
ATGATTGATACCATGCATTCAGCATCGAAAATCAGTTGGTTTGTGAGAAG
AATAGGGCGAAGCAAGTCCAAGAAGTACTACAGGCGGCTGGAGGAGGAGG
GTGAGGTTGGGAAAGCAGCCCCACTTGAAGCTCGAGAAGGTTACGTAGCC
ATGTACGTGGGCGAGGAGGCGAAGAGGTACGAAGTCCCGATCAAGTATCT
TTCTCTTCCAACGTTCAAGGAACTGCTGATGCAATCGCAAGAAGACTATC
TTGATGCCAAGATCGGTGGACCGATCCTTATTTCATGCACCATTGAGAAC
TTCGATCAACTGTTGAAGAATGCCAAGCACTTGCAGTTGGATCCAAGATG
TTCTTCGAGTTCGGTTGACTAA
back to top

protein sequence of Tc04v2_p014170.1

>Tc04v2_p014170.1 ID=Tc04v2_p014170.1|Name=Tc04v2_p014170.1|organism=Theobroma cacao|type=polypeptide|length=124bp
MIDTMHSASKISWFVRRIGRSKSKKYYRRLEEEGEVGKAAPLEAREGYVA
MYVGEEAKRYEVPIKYLSLPTFKELLMQSQEDYLDAKIGGPILISCTIEN
FDQLLKNAKHLQLDPRCSSSSVD*
back to top