Tc03v2_t024830.1

Overview
NameTc03v2_t024830.1
Unique NameTc03v2_t024830.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length990
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productprobable protein phosphatase 2C 51
NoteProbable protein phosphatase 2C 8
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606695
GenbankXM_007040445.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g024830Tc03v2_g024830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p024830.1Tc03v2_p024830.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto192957auto192957Theobroma cacaoexon
exon-auto192958auto192958Theobroma cacaoexon
exon-auto192959auto192959Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto192960auto192960Theobroma cacaoCDS
CDS-auto192961auto192961Theobroma cacaoCDS
CDS-auto192962auto192962Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t024830.1 ID=Tc03v2_t024830.1|Name=Tc03v2_t024830.1|organism=Theobroma cacao|type=mRNA|length=990bp
ATGAAGGGCTACAAATCGAAAAGACGGATTGGTTCTGAAGTGGTTATGGA
TGTCTACGTTACCAAGAAAAAGAGAGGGATCAAAAAGTTCACACAAAGGT
CTGAAAAGGTACAGGAGAAAAGAGAAGAAAATAAGGTTGAGAGCGTCACG
TGCGTGTCACATGGGTCGATATCGGTGATCGGACGCCGGAGAGCGATGGA
AGACGCCGTGAAGGTGTCGGTCGGAGAGATACAAGGGTATGACTTTTTCG
CTGTGTATGATGGGCACGGTGGGGCCCAAGTGGCTAACGCTTGCCGTGAT
AGGATGCACCAGTTGGTGGTGAAAGAGGTGGAGGAGAGGACGCGTGGAGG
GAAGGGACCGGAATGGGAGAAGGTGATGGCAGCTTGTTTTGCGAAGATGG
ACGAGGAGGTGAGCGGAGAAGATTATCAGGGTGGGGCGGGGGATGTGGAC
ATGAAAACGATGGGGTCCACGGCGGTGGTGGTGTTGGTAGGGAGGGATGT
GGTGGTGGTGGCCAACTGTGGTGACTCAAGAGCTGTTCTGTGTCGTGGCG
GCACCGCGGTGGCTTTGTCTAGTGATCATAAGCCTGACAGACCTGATGAA
AGGGAAAGAGTGGAAACAGCTGGGGGAACGGTCATAAACTGGAATGGAAG
TCGTGTCCTGGGAGTTCTTGCCACTTCAAGATCGATAGGAGATCAACATT
TGAAGCCATATGTAATCTCCAAACCAGAGGTCTCTGTTACTGAGCGAACT
AAGTCTGACAACTTTCTCGTATTAGCAAGTGATGGATTGTGGGATGTTGT
TTCCAGTGAAATTGCATGCGAAGTAGTCAAAAGACATCTTGACGGACAAA
TAAAGATGAGATTTTCAGATGATCCCCAAGGATGCACTGGCGACCGTGCA
GCAGAGGCGGCAGCAATGCTGGCTGAGTTAGCAGTTGCTCGAGGGAGCAC
CGACAACATTAGTGTCATTGTAGTTGAGTTGAAAAGGTAA
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protein sequence of Tc03v2_p024830.1

>Tc03v2_p024830.1 ID=Tc03v2_p024830.1|Name=Tc03v2_p024830.1|organism=Theobroma cacao|type=polypeptide|length=330bp
MKGYKSKRRIGSEVVMDVYVTKKKRGIKKFTQRSEKVQEKREENKVESVT
CVSHGSISVIGRRRAMEDAVKVSVGEIQGYDFFAVYDGHGGAQVANACRD
RMHQLVVKEVEERTRGGKGPEWEKVMAACFAKMDEEVSGEDYQGGAGDVD
MKTMGSTAVVVLVGRDVVVVANCGDSRAVLCRGGTAVALSSDHKPDRPDE
RERVETAGGTVINWNGSRVLGVLATSRSIGDQHLKPYVISKPEVSVTERT
KSDNFLVLASDGLWDVVSSEIACEVVKRHLDGQIKMRFSDDPQGCTGDRA
AEAAAMLAELAVARGSTDNISVIVVELKR*
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