Tc03v2_t023810.1

Overview
NameTc03v2_t023810.1
Unique NameTc03v2_t023810.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1125
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 106 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmitogen-activated protein kinase homolog MMK2
NoteMitogen-activated protein kinase 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18606582
GenbankXM_007040275.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g023810Tc03v2_g023810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p023810.1Tc03v2_p023810.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto191371auto191371Theobroma cacaoexon
exon-auto191372auto191372Theobroma cacaoexon
exon-auto191373auto191373Theobroma cacaoexon
exon-auto191374auto191374Theobroma cacaoexon
exon-auto191375auto191375Theobroma cacaoexon
exon-auto191376auto191376Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto191377auto191377Theobroma cacaoCDS
CDS-auto191378auto191378Theobroma cacaoCDS
CDS-auto191379auto191379Theobroma cacaoCDS
CDS-auto191380auto191380Theobroma cacaoCDS
CDS-auto191381auto191381Theobroma cacaoCDS
CDS-auto191382auto191382Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t023810.1 ID=Tc03v2_t023810.1|Name=Tc03v2_t023810.1|organism=Theobroma cacao|type=mRNA|length=1125bp
ATGGCAAGTACAAAAGAGTCAAGCTCAGAAGGAAGCAATATCAAGGGAGT
GCCGACTCATGGAGGTAAATATATTCAGTACAATGTGTACGGTAACTTGT
TTGAGGTATCCAGTAAGTACGTGCCTCCTATTCGACCAATCGGTAGAGGT
GCTTATGGCATCGTTTGTGCTGCTGTTAACTCAGAGACACGTGAGGAGGT
TGCCATTAAGAAGATTGGTAATGCATTTGATAACAGGATAGATGCAAAAA
GGACATTGAGAGAAATTAAGCTTCTTCGTCATATGGACCATGAAAATGTT
ATTGCCATGAAGGACATCGTTCGACCACCAAAAAAGGAGACCTTTAATGA
TGTTTATATTGTTTATGAATTGATGGACACTGATCTTCATCAAATAATTC
GCTCTGAACAACCATTGACAGATGATCATTGTCAGTACTTTCTATATCAG
TTGTTACGAGGGCTGAAGTATGTACACTCTGCCAATGTTTTGCATCGTGA
CCTTAAACCAAGCAATCTGCTTCTGAATGCAAATTGTGACCTTAAGATTG
GAGACTTTGGATTGGCAAGAACGACATCTGAAACAGATTTCATGACTGAG
TATGTTGTTACTCGGTGGTACCGAGCACCAGAGTTGCTCCTTAATTGTTC
AGAATACACTGCTGCCATTGATATTTGGTCTGTTGGTTGCATACTTGGTG
AAATTATGACGAGAGAACCTCTGTTTCCGGGGAAAGATTATGTTCATCAA
CTGAGACTCATCACAGAGTTGATAGGTTCACCTGATGACGCCAGTCTTGG
ATTTCTCCGAAGTGATAATGCCCGAAGGTACGTCAGACAGCTTCCACAAT
GTCGGAAGCAACAGTTTTCAGCTAGATTCCCAAATATGTCTGCTGTGGCT
GTTGATCTGCTAGAGAAAATGCTTGTATTTGACCCCAACAAACGCATTAC
AGTTGATGAGGCGCTTTGTCACCCATACTTGGTATCTCTTCACGATACCA
ATGATGAGCCTGTCTGTCCCAGGCCTTTTAGTTTTGATTTTGAGCAATCA
TCCTGCACTGAAGATCACATCAAAGAGCTTATCTGGAGGGAAACTGTGAA
ATTCAATCCAGATCCAGTCAATTAA
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protein sequence of Tc03v2_p023810.1

>Tc03v2_p023810.1 ID=Tc03v2_p023810.1|Name=Tc03v2_p023810.1|organism=Theobroma cacao|type=polypeptide|length=375bp
MASTKESSSEGSNIKGVPTHGGKYIQYNVYGNLFEVSSKYVPPIRPIGRG
AYGIVCAAVNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENV
IAMKDIVRPPKKETFNDVYIVYELMDTDLHQIIRSEQPLTDDHCQYFLYQ
LLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTE
YVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQ
LRLITELIGSPDDASLGFLRSDNARRYVRQLPQCRKQQFSARFPNMSAVA
VDLLEKMLVFDPNKRITVDEALCHPYLVSLHDTNDEPVCPRPFSFDFEQS
SCTEDHIKELIWRETVKFNPDPVN*
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