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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6, transcript variant X3 |
Note | SU(VAR)3-9, putative |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto183155 | auto183155 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc03v2_t020090.4 ID=Tc03v2_t020090.4|Name=Tc03v2_t020090.4|organism=Theobroma cacao|type=mRNA|length=2787bp ATGGGCGTTTCCGATAATATGCTGCATAAAGAGACATTAAAAGTGGCAAG TTGTAGTCATTCTGAGGGAAGGCTGGGAAGAGTGTCAACTGAAAATGGTC ACTTTGCCCCTGCACCCAAGTATAAGCAGCGTAAAGTTTCTGTTGTTCGG AATTTTCCACCAGGGTGTGGAAGGTTGGCTGCACCAATCGATAGACCAAG TGAGCAAGCGGTGAAATCCCACCCTGGTGAGAGCAGTTTGGAGAAGACTT CGGCAAGAAATTATCGTCCTCGTAGAGGAGTCACTGTTGTGAGAAACTTC CCTCCATTTTGTGGAAGAAATGCTCCACCTCTTAGCGAGGAGGAGCGCAT GAAATGGCTTACCTCTCTAAAGGACAAAGGTTTCAATCTAGAGAAGTTTG TAAATGAGGAAAAGCCCTCAGAGAAGACTATATGTACTGATGTGAAACAA GTGATAGAGGATGTTCAGGATGTCAATGCTCTAGAAGGTAAAATAGAAGG TAGTGCTCCTACACTCTCTGCAGAAGAAATTCAATCTAAACCTGAAGAGC TGGCTTCTGAAAAAATGAGGAAGCTATGTGCTTATGAAGCTTCATCCAGG AATGATATGGATGAGGACAAGGAAGATATGAGAGAAAAGAGCATCAAGTC TCCTTGCGAAACTTATCCAAATGAATTTGATAGCAAGTCCAAGCAAGTTA GTGAGACAAGTGATGGATATGTTAGAGGTTTGGAGGAAAATCCAATACAT GATATTGTAATCTATGCTGAGGACAAGAGTTTTGAGACAAAGCTTTCTGA TTCACCTGCCTTTGAGGATCAATTGCTGGAGGAGGACTGTGGGAGTCAAG AAGTTTTATTGGATGGGTCAATTGTGCAAGGCCTCATGGCTTCATCAACT TGTCCTCTGCCACAAGGGAAAGTGACCTGCAAACGTGACCTGGGGGGTGT TTCATTTAAAAGAAAAAGAAAGAACAATTTCATATTGCTACCAAGGGCAA ACCATGCTTTAGTAGCAAATAAGAATGAAGCAGAGAGCCCTGAAGAAACA TGTATTAAGAAGAATTCTTCTCCCACAAGGCCTTATAAAGGTCTTGGTCA AGTGGTTATCAGGGACAAGGAAGAATCAATCCAACAGGATGGACTATACA CAGATGATAATTTTGCTCTGAGATCATACAGTTATGATGTGAGTCTTCCT CCTTCTTGTCCAAGTAGTGTGTGTCATGATAATGATGCAATTACTACTCG GAACAAAGTGAGAGAGACATTACGCCTATTCCAAGCCATTTGTCGGAAGC TTTTACAGGAAGAAGAATCAAAGTTGAATGGAGAAGGAAAGACCTTTAAG AGGGTGGATATCCAAGCTGCAAAGATTCTCAAAGAGAAAGGGAAATACAT TAACACAGGCAAACAGATCATTGGACCTGTACCAGGTGTTGAAGTTGGTG ATGAGTTTCATTATTTTGTGGAGCTCAATATTGTTGGCCTTCATCGCCAA AGTCAGGGTGGTATAGATTACGTAAAGCAAGGTGATAGGATCATTGCTAC TAGTGTTATAGCATCAGGGGGCTATGACAATGACTTGGATAACTCAGATA TCTTGACTTACATGGGTCAGGGAGGGAATGTTATGCAGAAAGGTAAGCAA CCGGAAGACCAGAAACTTGAAAGAGGAAACCTTGCTTTGGCAAATAGCAT ATTTGTTAAGAATCCAGTGAGGGTTATTCGCGGTGAGACAAGGTCTTCTG ATTTGTTAGAAGGTAGGGGTAAAACATATGTTTATGATGGCCTCTATTTG GTGGAGGAGTGTAAGCAAGAATCAGGACCACATGGTAAGCTTGTCTACAA ATTTAAGCTGGTCAGAATTCCTGGTCAACCAGAGCTTGCTTGGAAAGTTG TAAAAAAATCTAATAAATCTAAAGTGTGGGAAGGGCTGTGTGCACATGAT ATCTCACAAGGGAAGGAGGTAATCCCCATTTGTGCTATAAACACCATAGA TAGTGAAAAACCTCCACCATTTGTGTATGTACCTCACATGATCTATCCTG ACTGGTGCCACCCTATTCCTCCCAAAGGTTGTGATTGTATTGATGGATGT TCAGAATCTGGGAAATGTTCCTGTGCAATGAAGAATGGAGGAGAGATCCC ATATAACCATAATGGGGCCATTGTTGAAGCAAAGCGCCTTGTCTATGAAT GTGGTCCTACTTGCAAGTGTCCTGCTTCTTGCTATAATAGAGTGAGCCAG CGTGGCATAAAATTTCAGCTTGAAATCTTTAAAACAGAATCGAGAGGCTG GGGTGTTAGATCCCTAAATTCTATCCCTTCCGGAAGTTTCATCTGTGAGT ATGCTGGAGAGCTCCTCGAAGATAGAGAAGCTGAAGAAAGAACAGGGAAT GATGAGTATCTGTTTGATATTGGAAACAACTACAGTGAAAGTTCTCTGTG GGATGGTCTTTCAACCCTAATGCCTGATGTGCATTCAAGTGTTTGCCAAG TTGTGCAAGACAGTGGTTTTACCATCGATGCAGCACAGCATGGCAATGTA GGGAGATTCATAAACCATAGTTGTTCACCTAATTTGTATGCACAAAATGT CCTTTATGATCACGATGACAGGAGAATCCCACATATAATGCTCTTTGCTG CTGAAAATATTCCTCCCTTGCAGGAGTTGACATACCATTACAATTATATG ATAGATCAGGTTCGTGATGAGAATGGTAACATAAAGAAGAAATTTTGCTA TTGTGGTTCTTCAGAGTGCACTGGTAGGCTGTATTGA back to topprotein sequence of Tc03v2_p020090.4 >Tc03v2_p020090.4 ID=Tc03v2_p020090.4|Name=Tc03v2_p020090.4|organism=Theobroma cacao|type=polypeptide|length=929bp
MGVSDNMLHKETLKVASCSHSEGRLGRVSTENGHFAPAPKYKQRKVSVVR NFPPGCGRLAAPIDRPSEQAVKSHPGESSLEKTSARNYRPRRGVTVVRNF PPFCGRNAPPLSEEERMKWLTSLKDKGFNLEKFVNEEKPSEKTICTDVKQ VIEDVQDVNALEGKIEGSAPTLSAEEIQSKPEELASEKMRKLCAYEASSR NDMDEDKEDMREKSIKSPCETYPNEFDSKSKQVSETSDGYVRGLEENPIH DIVIYAEDKSFETKLSDSPAFEDQLLEEDCGSQEVLLDGSIVQGLMASST CPLPQGKVTCKRDLGGVSFKRKRKNNFILLPRANHALVANKNEAESPEET CIKKNSSPTRPYKGLGQVVIRDKEESIQQDGLYTDDNFALRSYSYDVSLP PSCPSSVCHDNDAITTRNKVRETLRLFQAICRKLLQEEESKLNGEGKTFK RVDIQAAKILKEKGKYINTGKQIIGPVPGVEVGDEFHYFVELNIVGLHRQ SQGGIDYVKQGDRIIATSVIASGGYDNDLDNSDILTYMGQGGNVMQKGKQ PEDQKLERGNLALANSIFVKNPVRVIRGETRSSDLLEGRGKTYVYDGLYL VEECKQESGPHGKLVYKFKLVRIPGQPELAWKVVKKSNKSKVWEGLCAHD ISQGKEVIPICAINTIDSEKPPPFVYVPHMIYPDWCHPIPPKGCDCIDGC SESGKCSCAMKNGGEIPYNHNGAIVEAKRLVYECGPTCKCPASCYNRVSQ RGIKFQLEIFKTESRGWGVRSLNSIPSGSFICEYAGELLEDREAEERTGN DEYLFDIGNNYSESSLWDGLSTLMPDVHSSVCQVVQDSGFTIDAAQHGNV GRFINHSCSPNLYAQNVLYDHDDRRIPHIMLFAAENIPPLQELTYHYNYM IDQVRDENGNIKKKFCYCGSSECTGRLY* back to top
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