Tc03v2_t014830.4

Overview
NameTc03v2_t014830.4
Unique NameTc03v2_t014830.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1221
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productpectin acetylesterase 9, transcript variant X4
NotePectin acetylesterase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605578
GenbankXM_018117504.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g014830Tc03v2_g014830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p014830.4Tc03v2_p014830.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto171427auto171427Theobroma cacaoexon
exon-auto171428auto171428Theobroma cacaoexon
exon-auto171429auto171429Theobroma cacaoexon
exon-auto171430auto171430Theobroma cacaoexon
exon-auto171431auto171431Theobroma cacaoexon
exon-auto171432auto171432Theobroma cacaoexon
exon-auto171433auto171433Theobroma cacaoexon
exon-auto171434auto171434Theobroma cacaoexon
exon-auto171435auto171435Theobroma cacaoexon
exon-auto171436auto171436Theobroma cacaoexon
exon-auto171437auto171437Theobroma cacaoexon
exon-auto171438auto171438Theobroma cacaoexon
exon-auto171439auto171439Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto171440auto171440Theobroma cacaoCDS
CDS-auto171441auto171441Theobroma cacaoCDS
CDS-auto171442auto171442Theobroma cacaoCDS
CDS-auto171443auto171443Theobroma cacaoCDS
CDS-auto171444auto171444Theobroma cacaoCDS
CDS-auto171445auto171445Theobroma cacaoCDS
CDS-auto171446auto171446Theobroma cacaoCDS
CDS-auto171447auto171447Theobroma cacaoCDS
CDS-auto171448auto171448Theobroma cacaoCDS
CDS-auto171449auto171449Theobroma cacaoCDS
CDS-auto171450auto171450Theobroma cacaoCDS
CDS-auto171451auto171451Theobroma cacaoCDS
CDS-auto171452auto171452Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t014830.4 ID=Tc03v2_t014830.4|Name=Tc03v2_t014830.4|organism=Theobroma cacao|type=mRNA|length=1221bp
ATGAAGCTAATGAATATAGCTGCTGTAGCGAGCATACTGGTTTTGTTGGC
TTGCGCGCCATGGTGCGCATACTCGCAGGAGCGGCTCCTTGTTCGGATGA
CTCTGGTTCGAAACGCTCCTGCTCTTGGTGCCTTTTGCTTAGATGGGAGC
CTGCCAGCGTATCATCTACACAGAGGATTCGGCAATGGAGCAAACAATTG
GATTTTGTTCTTTGAGGGAGGTGGGTGGTGCGGACACAGAGAGCAATGCT
TGGACAGAGCCAAAACGAGCTACGGATCAACAAATCACATGAACAAGTGG
GCAATTTTTTCCGGTATCTTAAGTAACAACGCCTCCCTCAATCCAGATTT
TTACAATTGGAACCGAGTGAGGCTGAGATATTGTGATGGAGCCTCATTTG
CTGGAGATGGCAAGTTTGCTAATGGGACATCGTTGCTTTACTTCAGAGGG
CAAAAAATATGGGAAGCAATCATTCTTGATCTTCTACCCCAAGGCTTGGC
AAATGCACATATGGCTTTGCTAGCAGGTTGCTCAGCTGGGGGTCTGGCGA
CCTTTCTGCATTGTGACAACTTCACCAGGATGTTACCGAATGCTAGTGTG
AATTGCTTGAGTGATGCTGGTTTTATCCTGGACGAAAGAGATGTAAGTTT
GAACCACACCGTAAGGTCTATCTTTGAAGATATAGTTTCTCTTCAGGGAG
TAGAGCAAAATCTTGATCCCAAATGCACCAAGTCCATGAACTATCCTAAG
CTGTGCTTCTTTCCACACTATGCCTTGAAATATATCACAACTCCATTTTT
TGTCTTGAACTCTGCTTACGATGTAGTCCAATTTCATCGATTTTTGGTGC
CACCTTCTGCTGATGTTGAAGGAAAATGGAAACACTGCAAGCATGATCCA
GCAGCATGCAGTGCGGACCAGATAGCTATATTGCAAGGTTTCAGGCGTGA
CATGCTTGAAGCATTGAATTTCTTTCTTAAAGATTCACATAGAGGGGGAA
CTTTCATAAATTCATGCTTTGCCCATTGCCAAAGTGATGCACAAGAATCA
TGGTTTGCCGTTAATTCTCCAAGAATACACAATAAGACCATTGCTGAAGT
AGTTGGTGATTGGTACTTCACCAGAAGAGAAGCAAAGGAGATTGATTGTG
AATATCCTTGTGACACAACGTGCCACAACCTAATGCCAGTGCCTCAGTGC
AAACATTGCAGATTTCATTGA
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protein sequence of Tc03v2_p014830.4

>Tc03v2_p014830.4 ID=Tc03v2_p014830.4|Name=Tc03v2_p014830.4|organism=Theobroma cacao|type=polypeptide|length=407bp
MKLMNIAAVASILVLLACAPWCAYSQERLLVRMTLVRNAPALGAFCLDGS
LPAYHLHRGFGNGANNWILFFEGGGWCGHREQCLDRAKTSYGSTNHMNKW
AIFSGILSNNASLNPDFYNWNRVRLRYCDGASFAGDGKFANGTSLLYFRG
QKIWEAIILDLLPQGLANAHMALLAGCSAGGLATFLHCDNFTRMLPNASV
NCLSDAGFILDERDVSLNHTVRSIFEDIVSLQGVEQNLDPKCTKSMNYPK
LCFFPHYALKYITTPFFVLNSAYDVVQFHRFLVPPSADVEGKWKHCKHDP
AACSADQIAILQGFRRDMLEALNFFLKDSHRGGTFINSCFAHCQSDAQES
WFAVNSPRIHNKTIAEVVGDWYFTRREAKEIDCEYPCDTTCHNLMPVPQC
KHCRFH*
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