Tc03v2_t014830.3

Overview
NameTc03v2_t014830.3
Unique NameTc03v2_t014830.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1221
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productpectin acetylesterase 9, transcript variant X3
NotePectin acetylesterase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605578
GenbankXM_007038649.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g014830Tc03v2_g014830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p014830.3Tc03v2_p014830.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto171399auto171399Theobroma cacaoexon
exon-auto171400auto171400Theobroma cacaoexon
exon-auto171401auto171401Theobroma cacaoexon
exon-auto171402auto171402Theobroma cacaoexon
exon-auto171403auto171403Theobroma cacaoexon
exon-auto171404auto171404Theobroma cacaoexon
exon-auto171405auto171405Theobroma cacaoexon
exon-auto171406auto171406Theobroma cacaoexon
exon-auto171407auto171407Theobroma cacaoexon
exon-auto171408auto171408Theobroma cacaoexon
exon-auto171409auto171409Theobroma cacaoexon
exon-auto171410auto171410Theobroma cacaoexon
exon-auto171411auto171411Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto171412auto171412Theobroma cacaoCDS
CDS-auto171413auto171413Theobroma cacaoCDS
CDS-auto171414auto171414Theobroma cacaoCDS
CDS-auto171415auto171415Theobroma cacaoCDS
CDS-auto171416auto171416Theobroma cacaoCDS
CDS-auto171417auto171417Theobroma cacaoCDS
CDS-auto171418auto171418Theobroma cacaoCDS
CDS-auto171419auto171419Theobroma cacaoCDS
CDS-auto171420auto171420Theobroma cacaoCDS
CDS-auto171421auto171421Theobroma cacaoCDS
CDS-auto171422auto171422Theobroma cacaoCDS
CDS-auto171423auto171423Theobroma cacaoCDS
CDS-auto171424auto171424Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t014830.3 ID=Tc03v2_t014830.3|Name=Tc03v2_t014830.3|organism=Theobroma cacao|type=mRNA|length=1221bp
ATGAAGCTAATGAATATAGCTGCTGTAGCGAGCATACTGGTTTTGTTGGC
TTGCGCGCCATGGTGCGCATACTCGCAGGAGCGGCTCCTTGTTCGGATGA
CTCTGGTTCGAAACGCTCCTGCTCTTGGTGCCTTTTGCTTAGATGGGAGC
CTGCCAGCGTATCATCTACACAGAGGATTCGGCAATGGAGCAAACAATTG
GATTTTGTTCTTTGAGGGAGGTGGGTGGTGCGGACACAGAGAGCAATGCT
TGGACAGAGCCAAAACGAGCTACGGATCAACAAATCACATGAACAAGTGG
GCAATTTTTTCCGGTATCTTAAGTAACAACGCCTCCCTCAATCCAGATTT
TTACAATTGGAACCGAGTGAGGCTGAGATATTGTGATGGAGCCTCATTTG
CTGGAGATGGCAAGTTTGCTAATGGGACATCGTTGCTTTACTTCAGAGGG
CAAAAAATATGGGAAGCAATCATTCTTGATCTTCTACCCCAAGGCTTGGC
AAATGCACATATGGCTTTGCTAGCAGGTTGCTCAGCTGGGGGTCTGGCGA
CCTTTCTGCATTGTGACAACTTCACCAGGATGTTACCGAATGCTAGTGTG
AATTGCTTGAGTGATGCTGGTTTTATCCTGGACGAAAGAGATGTAAGTTT
GAACCACACCGTAAGGTCTATCTTTGAAGATATAGTTTCTCTTCAGGGAG
TAGAGCAAAATCTTGATCCCAAATGCACCAAGTCCATGAACTATCCTAAG
CTGTGCTTCTTTCCACACTATGCCTTGAAATATATCACAACTCCATTTTT
TGTCTTGAACTCTGCTTACGATGTAGTCCAATTTCATCGATTTTTGGTGC
CACCTTCTGCTGATGTTGAAGGAAAATGGAAACACTGCAAGCATGATCCA
GCAGCATGCAGTGCGGACCAGATAGCTATATTGCAAGGTTTCAGGCGTGA
CATGCTTGAAGCATTGAATTTCTTTCTTAAAGATTCACATAGAGGGGGAA
CTTTCATAAATTCATGCTTTGCCCATTGCCAAAGTGATGCACAAGAATCA
TGGTTTGCCGTTAATTCTCCAAGAATACACAATAAGACCATTGCTGAAGT
AGTTGGTGATTGGTACTTCACCAGAAGAGAAGCAAAGGAGATTGATTGTG
AATATCCTTGTGACACAACGTGCCACAACCTAATGCCAGTGCCTCAGATT
TCATTGATGATTCATAAATAA
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protein sequence of Tc03v2_p014830.3

>Tc03v2_p014830.3 ID=Tc03v2_p014830.3|Name=Tc03v2_p014830.3|organism=Theobroma cacao|type=polypeptide|length=407bp
MKLMNIAAVASILVLLACAPWCAYSQERLLVRMTLVRNAPALGAFCLDGS
LPAYHLHRGFGNGANNWILFFEGGGWCGHREQCLDRAKTSYGSTNHMNKW
AIFSGILSNNASLNPDFYNWNRVRLRYCDGASFAGDGKFANGTSLLYFRG
QKIWEAIILDLLPQGLANAHMALLAGCSAGGLATFLHCDNFTRMLPNASV
NCLSDAGFILDERDVSLNHTVRSIFEDIVSLQGVEQNLDPKCTKSMNYPK
LCFFPHYALKYITTPFFVLNSAYDVVQFHRFLVPPSADVEGKWKHCKHDP
AACSADQIAILQGFRRDMLEALNFFLKDSHRGGTFINSCFAHCQSDAQES
WFAVNSPRIHNKTIAEVVGDWYFTRREAKEIDCEYPCDTTCHNLMPVPQI
SLMIHK*
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