Tc03v2_t014830.2

Overview
NameTc03v2_t014830.2
Unique NameTc03v2_t014830.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1152
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productpectin acetylesterase 9, transcript variant X5
NotePectin acetylesterase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605578
GenbankXM_018117505.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g014830Tc03v2_g014830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p014830.2Tc03v2_p014830.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto171373auto171373Theobroma cacaoexon
exon-auto171374auto171374Theobroma cacaoexon
exon-auto171375auto171375Theobroma cacaoexon
exon-auto171376auto171376Theobroma cacaoexon
exon-auto171377auto171377Theobroma cacaoexon
exon-auto171378auto171378Theobroma cacaoexon
exon-auto171379auto171379Theobroma cacaoexon
exon-auto171380auto171380Theobroma cacaoexon
exon-auto171381auto171381Theobroma cacaoexon
exon-auto171382auto171382Theobroma cacaoexon
exon-auto171383auto171383Theobroma cacaoexon
exon-auto171384auto171384Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto171385auto171385Theobroma cacaoCDS
CDS-auto171386auto171386Theobroma cacaoCDS
CDS-auto171387auto171387Theobroma cacaoCDS
CDS-auto171388auto171388Theobroma cacaoCDS
CDS-auto171389auto171389Theobroma cacaoCDS
CDS-auto171390auto171390Theobroma cacaoCDS
CDS-auto171391auto171391Theobroma cacaoCDS
CDS-auto171392auto171392Theobroma cacaoCDS
CDS-auto171393auto171393Theobroma cacaoCDS
CDS-auto171394auto171394Theobroma cacaoCDS
CDS-auto171395auto171395Theobroma cacaoCDS
CDS-auto171396auto171396Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t014830.2 ID=Tc03v2_t014830.2|Name=Tc03v2_t014830.2|organism=Theobroma cacao|type=mRNA|length=1152bp
ATGTCAACTCACCACGTCAGCAGTTCAAACTTTGAACTTTACGGAGGTGG
GTGGTGCGGACACAGAGAGCAATGCTTGGACAGAGCCAAAACGAGCTACG
GATCAACAAATCACATGAACAAGTGGGCAATTTTTTCCGGTATCTTAAGT
AACAACGCCTCCCTCAATCCAGATTTTTACAATTGGAACCGAGTGAGGCT
GAGATATTGTGATGGAGCCTCATTTGCTGGAGATGGCAAGTTTGCTAATG
GGACATCGTTGCTTTACTTCAGAGGGCAAAAAATATGGGAAGCAATCATT
CTTGATCTTCTACCCCAAGGCTTGGCAAATGCACATATGGCTTTGCTAGC
AGGTTGCTCAGCTGGGGGTCTGGCGACCTTTCTGCATTGTGACAACTTCA
CCAGGATGTTACCGAATGCTAGTGTGAATTGCTTGAGTGATGCTGGTTTT
ATCCTGGACGAAAGAGATGTAAGTTTGAACCACACCGTAAGGTCTATCTT
TGAAGATATAGTTTCTCTTCAGGGAGTAGAGCAAAATCTTGATCCCAAAT
GCACCAAGTCCATGAACTATCCTAAGCTGTGCTTCTTTCCACACTATGCC
TTGAAATATATCACAACTCCATTTTTTGTCTTGAACTCTGCTTACGATGT
AGTCCAATTTCATCGATTTTTGGTGCCACCTTCTGCTGATGTTGAAGGAA
AATGGAAACACTGCAAGCATGATCCAGCAGCATGCAGTGCGGACCAGATA
GCTATATTGCAAGGTTTCAGGCGTGACATGCTTGAAGCATTGAATTTCTT
TCTTAAAGATTCACATAGAGGGGGAACTTTCATAAATTCATGCTTTGCCC
ATTGCCAAAGTGATGCACAAGAATCATGGTTTGCCGTTAATTCTCCAAGA
ATACACAATAAGACCATTGCTGAAGTAGTTGGTGATTGGTACTTCACCAG
AAGAGAAGCAAAGGAGATTGATTGTGAATATCCTTGTGACACAACGTGCC
ACAACCTAATGCCAGTGCCTCAGGGTACGGACTGTGCAAAATGTGGTTCA
GTTGGCAACAAAACCTTGACATCAAAAGCTGGTTCCCATGACAGGATTTG
GAGCAAGTACTCAATGATCTTAGTGGTTTTGCTGTTACCATTATGCCTTT
GA
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protein sequence of Tc03v2_p014830.2

>Tc03v2_p014830.2 ID=Tc03v2_p014830.2|Name=Tc03v2_p014830.2|organism=Theobroma cacao|type=polypeptide|length=384bp
MSTHHVSSSNFELYGGGWCGHREQCLDRAKTSYGSTNHMNKWAIFSGILS
NNASLNPDFYNWNRVRLRYCDGASFAGDGKFANGTSLLYFRGQKIWEAII
LDLLPQGLANAHMALLAGCSAGGLATFLHCDNFTRMLPNASVNCLSDAGF
ILDERDVSLNHTVRSIFEDIVSLQGVEQNLDPKCTKSMNYPKLCFFPHYA
LKYITTPFFVLNSAYDVVQFHRFLVPPSADVEGKWKHCKHDPAACSADQI
AILQGFRRDMLEALNFFLKDSHRGGTFINSCFAHCQSDAQESWFAVNSPR
IHNKTIAEVVGDWYFTRREAKEIDCEYPCDTTCHNLMPVPQGTDCAKCGS
VGNKTLTSKAGSHDRIWSKYSMILVVLLLPLCL*
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