Tc03v2_t014820.1

Overview
NameTc03v2_t014820.1
Unique NameTc03v2_t014820.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1221
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productpectin acetylesterase 9, transcript variant X1
NotePectin acetylesterase 9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605577
GenbankXM_018117507.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g014820Tc03v2_g014820Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p014820.1Tc03v2_p014820.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto171287auto171287Theobroma cacaoexon
exon-auto171288auto171288Theobroma cacaoexon
exon-auto171289auto171289Theobroma cacaoexon
exon-auto171290auto171290Theobroma cacaoexon
exon-auto171291auto171291Theobroma cacaoexon
exon-auto171292auto171292Theobroma cacaoexon
exon-auto171293auto171293Theobroma cacaoexon
exon-auto171294auto171294Theobroma cacaoexon
exon-auto171295auto171295Theobroma cacaoexon
exon-auto171296auto171296Theobroma cacaoexon
exon-auto171297auto171297Theobroma cacaoexon
exon-auto171298auto171298Theobroma cacaoexon
exon-auto171299auto171299Theobroma cacaoexon
exon-auto171300auto171300Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto171301auto171301Theobroma cacaoCDS
CDS-auto171302auto171302Theobroma cacaoCDS
CDS-auto171303auto171303Theobroma cacaoCDS
CDS-auto171304auto171304Theobroma cacaoCDS
CDS-auto171305auto171305Theobroma cacaoCDS
CDS-auto171306auto171306Theobroma cacaoCDS
CDS-auto171307auto171307Theobroma cacaoCDS
CDS-auto171308auto171308Theobroma cacaoCDS
CDS-auto171309auto171309Theobroma cacaoCDS
CDS-auto171310auto171310Theobroma cacaoCDS
CDS-auto171311auto171311Theobroma cacaoCDS
CDS-auto171312auto171312Theobroma cacaoCDS
CDS-auto171313auto171313Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t014820.1 ID=Tc03v2_t014820.1|Name=Tc03v2_t014820.1|organism=Theobroma cacao|type=mRNA|length=1221bp
ATGAACGTGAAGATGATGATGAATATAGAGATAATGCTGAGTTTACTGCT
TTCTCTTGCTTTCGCTCCATGGTGCATTTACTCGCAGGAGCAACTCCTGG
TTGGTATGACTCTGGTTCGAAACGCCATCGCGTACGGCGCCGTTTGTCTG
GATGGAAGTTTGCCTGCGTATCATCTGCACAGAGGATTCGGCGCTGGAGA
AAACAACTGGATTTTACAGTTTGAGGGTGGTGGGTGGTGTAATGATATAC
CATCATGCCTGGAGAGAGCAAATACGCGCCGTGGATCGACTCGTTACATG
AACAAGTTCGAAGTCTTCTCTGGCATCTTAAGCGACAACGACTCCCTCAA
TCCAGATTTTTACAACTGGAACCGTGTGAAGCTGAGATATTGTGATGGAG
CCTCATTTTCAGGAGATAGCAAGTTTGACAACGGGACGTCATTGCTTTAT
TTCAGAGGGCAGAAAATTTGGGAAGCGATTATCCGTGACCTTTTACCTAA
AGGGTTGGCAAGTGCACGCAAGGCATTGCTTTCAGGTTGCTCTGCCGGGG
GTCTAGCAACCTTTCTGCACTGTGACAACTTCACAAAGATTTTACCAAGC
AATGCCAGTGTGAAATGTTTAAGTGATGCTGGATTTTTTCTGGATGAACA
AGACATAAGTTTGAATTACACTATGAGGTCCTTCTATCATGATCTAGTTG
CTCTACAGGGGATAGAGGAAAATCTAAATCCAAATTGCACAATGTCGATC
AACAACCAAAAGCTGTGTTTCTTTCCCCAGTATGCTTTGAAATATATCAC
AACGCCGTATTTTATCTTGAACTCAGCTTATGATGTATTCCAGTTTCATC
ATAGTCTGGTTCCACCTTCTGCTGATTTGCATGGACGTTGGAATCGTTGC
AAGCTTAATCCAGCAGCATGCAATGCAAGTCAGATCAATGTATTGCAAGG
TTTGAGGCAGGATATGCTTACAGCTCTTTACTCATTCTACAAAAATTCAA
GTAGAGGGGGGATGTTTATAAATTCATGCTTTGCTCATTGCCAAAGTGAG
TCACAGGACACATGGTTTGCTGTTGATTCTCCAAGAATACACAATAAGAC
TATTGCAGAAGCAGTTGGTGATTGGTACTTTAGCAGAAGAGTAACAAAAG
AGATTGATTGCCCGTATCCTTGTGATACCACTTGCCACAACCTGATACCG
TCACCTCAGGGTTTAAGATAG
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protein sequence of Tc03v2_p014820.1

>Tc03v2_p014820.1 ID=Tc03v2_p014820.1|Name=Tc03v2_p014820.1|organism=Theobroma cacao|type=polypeptide|length=407bp
MNVKMMMNIEIMLSLLLSLAFAPWCIYSQEQLLVGMTLVRNAIAYGAVCL
DGSLPAYHLHRGFGAGENNWILQFEGGGWCNDIPSCLERANTRRGSTRYM
NKFEVFSGILSDNDSLNPDFYNWNRVKLRYCDGASFSGDSKFDNGTSLLY
FRGQKIWEAIIRDLLPKGLASARKALLSGCSAGGLATFLHCDNFTKILPS
NASVKCLSDAGFFLDEQDISLNYTMRSFYHDLVALQGIEENLNPNCTMSI
NNQKLCFFPQYALKYITTPYFILNSAYDVFQFHHSLVPPSADLHGRWNRC
KLNPAACNASQINVLQGLRQDMLTALYSFYKNSSRGGMFINSCFAHCQSE
SQDTWFAVDSPRIHNKTIAEAVGDWYFSRRVTKEIDCPYPCDTTCHNLIP
SPQGLR*
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