Tc03v2_t009660.1

Overview
NameTc03v2_t009660.1
Unique NameTc03v2_t009660.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length990
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 12 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product28 kDa ribonucleoprotein, chloroplastic
Note31 kDa ribonucleoprotein, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604996
GenbankXM_007037734.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009660Tc03v2_g009660Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009660.1Tc03v2_p009660.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto159468auto159468Theobroma cacaoexon
exon-auto159469auto159469Theobroma cacaoexon
exon-auto159470auto159470Theobroma cacaoexon
exon-auto159471auto159471Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto159472auto159472Theobroma cacaoCDS
CDS-auto159473auto159473Theobroma cacaoCDS
CDS-auto159474auto159474Theobroma cacaoCDS
CDS-auto159475auto159475Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009660.1 ID=Tc03v2_t009660.1|Name=Tc03v2_t009660.1|organism=Theobroma cacao|type=mRNA|length=990bp
ATGTCTGCTGTAACCAAACCCATATCCCTGGCAGACTCATTGTGCCTCGC
CTCTCTCGCTTCCCTCTTCTCCACTTCTTCCAAAGCTCCGTCTCTCCTCT
CACTCCCTCCAAAATCCATCAAGCTTTTCCTCTCATCTTCCCGGTCTCCA
TCCCTTTCAGCACTCAGAACAAAAACCCATTTCCCGTCTCTAGTTGCCTT
GGTGGCCCAGACTTCAGATTGGGCCCAGCAAGAGGAAGAAAATGACACCA
CCATAACTATTGATGGGCAAGAGCAGCAAGTCCAGGAAGAAACTGAAAGT
GAAGAAGGAGAATCAACGTGGGAAAATGAAGAAAATGATGGGGCTGAAGC
AAATTTGTCTGATTGGGATCCTGAGGAAAGTGAGGATGCAGTTTTTGAAG
GACAGGGTGGTGATTCAGAAGAAGAGGACTCTATTCAACCTCCTGAGGAA
GCTAAATTGTTTGTTGGGAATTTGCCTTATGATGTTGATAGTCAAAGTTT
GGCTATGCTCTTTGAGAAAGCTGGAACCGTGGAAATCGCTGAGGTTATTT
ACAATAGGGAAACTGAGCAAAGTCGTGGCTTTGGGTTTGTAACTATGAGT
TCCGTTGAGGAAGCTGAGAAGGCTGCTGAACTGTTTAATCGTTATGATCT
AAATGGAAGGCTCTTGACTGTTAATAAGGCTTCTCCTAGAGGATCACGTT
TCGACCGACCCCCTCGTGTGTATGAACCTGCTTTTAGAATCTATGTGGGT
AACATTCCATGGGATGTGGATAATGCTCGACTGGAGCAGGTCTTCAGTGA
ACATGGTAAGGTAGTGGAGGCTCGTGTAGTCTATGATAGGGAGACTGGCC
GTTCTCGTGGTTTTGGTTTCGTGACTATGTCCTCAGAGACTGAATTGAAT
GATGCCATTGCTGCTCTCGACGGACAGATTCTGGAGGGGAGAGCGATAAG
AGTAAATGTTGCAGAGGAAAGACCAAGGCGAGGCTTTTGA
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protein sequence of Tc03v2_p009660.1

>Tc03v2_p009660.1 ID=Tc03v2_p009660.1|Name=Tc03v2_p009660.1|organism=Theobroma cacao|type=polypeptide|length=330bp
MSAVTKPISLADSLCLASLASLFSTSSKAPSLLSLPPKSIKLFLSSSRSP
SLSALRTKTHFPSLVALVAQTSDWAQQEEENDTTITIDGQEQQVQEETES
EEGESTWENEENDGAEANLSDWDPEESEDAVFEGQGGDSEEEDSIQPPEE
AKLFVGNLPYDVDSQSLAMLFEKAGTVEIAEVIYNRETEQSRGFGFVTMS
SVEEAEKAAELFNRYDLNGRLLTVNKASPRGSRFDRPPRVYEPAFRIYVG
NIPWDVDNARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSSETELN
DAIAALDGQILEGRAIRVNVAEERPRRGF*
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