Tc03v2_t009570.1

Overview
NameTc03v2_t009570.1
Unique NameTc03v2_t009570.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1578
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productcytochrome P450 71A26
NoteCytochrome P450 71A25
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604984
GenbankXM_007037719.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009570Tc03v2_g009570Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009570.1Tc03v2_p009570.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto159265auto159265Theobroma cacaoexon
exon-auto159266auto159266Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto159267auto159267Theobroma cacaoCDS
CDS-auto159268auto159268Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009570.1 ID=Tc03v2_t009570.1|Name=Tc03v2_t009570.1|organism=Theobroma cacao|type=mRNA|length=1578bp
ATGTCGAAATTTTTGCAATTTTCAGAGCAAGATGAAATCTTTTTCCTGTC
ATATCCCTGGTTGTTCGCCATTCTAGCCATTTTCTTCGTAGTCCTACTCA
AGCATATTTTCAATCCTTCCACAAGCAACGCAAAGCTAGCATTGCCACCG
TCTCCATCAAAATTTCCAATTTTCGGAAACCTCCACAATATTGGTTTGCA
ACCTCATCGGTCACTCCGTGCCTTAGCTCAACGGTTTGGCCCTCTCATGC
TGCTTCGCCTTGGCAGTGTGCCAGTACTTGTTGTATCCTCTTCTGATGCT
GCCCGTGAGATCATGAAAACACATGATCTGACATTCGCAAACAGACCGAA
ATCAAGTAGCTCCCAGAAGCTTCTCTACGATTATAAAGATGTATCATCCG
CACCTTATGGTGAGTACTGGAGGCAAATGAAAAGCGCATGCGTGCTACAT
TTTCTAAGTAACAAAAGGGTTCAATCCTTTCGCGTTGTAAGAGAAGAAGA
AACCGCTCTCATAATTGATAAGATTAAAGAGTCTAGTTCTTCTGCTTTGC
CAGTAAATCTAACTGAAATATTTGCTATGCTGACAAACAATGTTATCTGT
CGAGCCTCCTTAGGAAGAAAGTACAGTGAAGGGGAAGGTGGGAAGAAGTT
TAAGAAGCTTTTGTGCGAGTTTGGTGAGTTGTTGGGCGGTTTCAATGTTG
GGGACTATATTCCATGGCTTGCGTGGGTAAGCCGTATCAACGGATTGGAA
GCGAAAATGGAGAAAGTGGCTAAGGAGTTTGATGCTTTTCTGGAAGGAGT
GGTTGACGAACACATGGACCGGTATAAGAGGGGGCATAATGATCATGACG
ATACCAGGCTTCAACATGAAGAGCAAAAAAGCTTTGTGGATGTTTTGCTT
GAAATTCAGAGGGAAAACACGGTCGGCTTTCCCCTTGAGAGAGTTAGCGT
TAAGGCTCTTATCTTGGATATGTTTGCCGCTGGTACTGACACTACATACA
CAGTCCTGGAGTGGGCAATGACAGAACTCTTGAGGCACCCAGAGATTATG
AAAGAACTGCAAAAAGAGGTCAGGCAAGTTTGCGGTGACGAAACGTACGT
ATCGGAGGATGATCTGGATAAGATGCACTACTTAAAAGCTGTGATAAAAG
AGTCTCTTCGTTTACATCCTCCAATTCCATTGCTAGTTCCAAGAATATCT
ACAGAAGATGTCAAGATCAAGGGCTATGACATTGCTCGAGGAACTCAAGT
TATTATCAATGCTTGGGCAATCGGAAGAGACCCCCTGTCGTGGGCGAAAC
CAGAAGAATTCCTTCCGGAGAGGTTCTTGAACAATTCCATAGATTTCAAA
GGACATGACTTTGAATTGATTCCATTTGGATCTGGAAGGAGGATTTGTCC
AGGTATCCTATTTGCAATGAAAATAAATGAGCTCTTCCTAGCGAATCTGG
TGCACAAGTTTGACTGGTCATTGCCTGGTGGAGCAAAGGAGGAGGATTTA
GACATGGGTGAATCCTTTGGCCTTACCACTCACCGAAGATATCCTCTTAT
AGCTATTGCAAACCCATCTTCTTTCTAG
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protein sequence of Tc03v2_p009570.1

>Tc03v2_p009570.1 ID=Tc03v2_p009570.1|Name=Tc03v2_p009570.1|organism=Theobroma cacao|type=polypeptide|length=526bp
MSKFLQFSEQDEIFFLSYPWLFAILAIFFVVLLKHIFNPSTSNAKLALPP
SPSKFPIFGNLHNIGLQPHRSLRALAQRFGPLMLLRLGSVPVLVVSSSDA
AREIMKTHDLTFANRPKSSSSQKLLYDYKDVSSAPYGEYWRQMKSACVLH
FLSNKRVQSFRVVREEETALIIDKIKESSSSALPVNLTEIFAMLTNNVIC
RASLGRKYSEGEGGKKFKKLLCEFGELLGGFNVGDYIPWLAWVSRINGLE
AKMEKVAKEFDAFLEGVVDEHMDRYKRGHNDHDDTRLQHEEQKSFVDVLL
EIQRENTVGFPLERVSVKALILDMFAAGTDTTYTVLEWAMTELLRHPEIM
KELQKEVRQVCGDETYVSEDDLDKMHYLKAVIKESLRLHPPIPLLVPRIS
TEDVKIKGYDIARGTQVIINAWAIGRDPLSWAKPEEFLPERFLNNSIDFK
GHDFELIPFGSGRRICPGILFAMKINELFLANLVHKFDWSLPGGAKEEDL
DMGESFGLTTHRRYPLIAIANPSSF*
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