Tc03v2_t008270.1

Overview
NameTc03v2_t008270.1
Unique NameTc03v2_t008270.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1524
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 25 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productflavonoid 3'-monooxygenase
NoteFlavonoid 3'-monooxygenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604820
GenbankXM_007037486.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g008270Tc03v2_g008270Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p008270.1Tc03v2_p008270.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto156470auto156470Theobroma cacaoexon
exon-auto156471auto156471Theobroma cacaoexon
exon-auto156472auto156472Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto156473auto156473Theobroma cacaoCDS
CDS-auto156474auto156474Theobroma cacaoCDS
CDS-auto156475auto156475Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t008270.1 ID=Tc03v2_t008270.1|Name=Tc03v2_t008270.1|organism=Theobroma cacao|type=mRNA|length=1524bp
ATGGCTTCATTTCTTCTGTACTCTATACTCTCTGCAGTTTTTCTGTATTT
CATTTTCGCTACCCTGAGGAAGCGCCACCGTCTGCCTCTCCCTCCGGGCC
CAAAACCATGGCCGATCATTGGAAACTTGCCTCATATGGGCCCAGTGCCT
CACCACAGCTTAGCAGCCTTGGCCAAAGTTTATGGGCCCCTCATGCACCT
GAGGTTAGGATTCGTGGACGTGGTGGTGGCGGCGTCGGCATCCGTGGCGG
CCCAATTCTTGAAGGTGCATGACGCCAATTTCTCTAGCCGGCCGCCCAAT
TCTGGTGCCAAGTATGTTGCTTATAACTACCAGGACCTGGTGTTTGCGCC
TTATGGACCCAGGTGGCGGATGCTCCGTAAAATCAGCTCCGTCCATCTAT
TCTCCGGCAAGGCTTTGGATGACTTTAGACACGTTCGCCAGGATGAGGTA
GGGGTGCTGGTACGAGCTTTGGCAGATGCTAAAACAAAGGTGAACTTGGG
ACAGCTGCTGAACGTGTGCACAGTGAATGCGCTAGGGCGGGTGATGCTTG
GGAAAAGGGTGTTCGGTGACGGTAGCGGGAAGGCTGATCCGGAAGCGGAT
GAATTCAAGTCCATGGTTGTGGAGCTGATGGTCTTGGCTGGGGTTGTCAA
CATTGGTGACTTCATTCCAGCGCTGGAGTGGCTAGACTTACAGGGGGTAC
AAGCCAAAATGAAGAAACTCCACAAGAGATTTGACAGGTTTTTGAGTGCT
ATTCTTGAGGAACACAAAATCAAGGCTCGAGATGGCAGTGGGCAGCACAA
GGATTTGCTTAGTACGTTTATTTCTTTGGAGGATGCTGACGGCGAAGGAG
GAAAGCTCACCGATACTGAAATCAAAGCATTGCTCTTGAACATGTTCACA
GCTGGTACTGATACCTCATCAAGCACTGTGGAGTGGGCGATAGCAGAGCT
TATTAGGCATCCCAAGATCTTAGCCCAAGTCCGAAAAGAGTTGGACTCAG
TTGTGGGCCGAGACCGGCTTGTCTCGGACTTAGACCTACCCAATCTCACT
TATTTCCAAGCTGTAATCAAGGAAACCTTCCGGCTGCATCCATCAACACC
ACTCTCCCTCCCTCGGATGGCATCCGAGAGCTGTGAGATCAATGGCTACC
ACATCCCTAAGGGTGCCACACTGTTGGTCAACGTATGGGCCATAGCTCGT
GACCCTGACGAGTGGAAGGACCCGTTGGAGTTCCGGCCCGAAAGGTTTTT
ACCCGGGGGTGAAAGGCCCAACGCTGATGTCAGGGGAAATGATTTTGAGG
TTATACCATTTGGCGCTGGACGTAGAATATGTGCGGGCATGAGCTTAGGG
TTGCGCATGGTGCAACTATTAGCGGCTACGTTGGTGCATGCTTTCGACTG
GGAGCTGGCTGATGGATTAATGCCTGAGAAGCTGAACATGGAGGAAGCTT
TCGGCTTGACGTTACAACGAGCCGCGCCATTGATGGTGCACCCCAGGCCA
CGGTTATCCCCGCGTGCTTATTAA
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protein sequence of Tc03v2_p008270.1

>Tc03v2_p008270.1 ID=Tc03v2_p008270.1|Name=Tc03v2_p008270.1|organism=Theobroma cacao|type=polypeptide|length=508bp
MASFLLYSILSAVFLYFIFATLRKRHRLPLPPGPKPWPIIGNLPHMGPVP
HHSLAALAKVYGPLMHLRLGFVDVVVAASASVAAQFLKVHDANFSSRPPN
SGAKYVAYNYQDLVFAPYGPRWRMLRKISSVHLFSGKALDDFRHVRQDEV
GVLVRALADAKTKVNLGQLLNVCTVNALGRVMLGKRVFGDGSGKADPEAD
EFKSMVVELMVLAGVVNIGDFIPALEWLDLQGVQAKMKKLHKRFDRFLSA
ILEEHKIKARDGSGQHKDLLSTFISLEDADGEGGKLTDTEIKALLLNMFT
AGTDTSSSTVEWAIAELIRHPKILAQVRKELDSVVGRDRLVSDLDLPNLT
YFQAVIKETFRLHPSTPLSLPRMASESCEINGYHIPKGATLLVNVWAIAR
DPDEWKDPLEFRPERFLPGGERPNADVRGNDFEVIPFGAGRRICAGMSLG
LRMVQLLAATLVHAFDWELADGLMPEKLNMEEAFGLTLQRAAPLMVHPRP
RLSPRAY*
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