Tc03v2_t000800.2

Overview
NameTc03v2_t000800.2
Unique NameTc03v2_t000800.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length777
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Productcarbonic anhydrase 2, transcript variant X2
NoteBeta carbonic anhydrase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603899
GenbankXM_018118549.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g000800Tc03v2_g000800Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p000800.2Tc03v2_p000800.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto141809auto141809Theobroma cacaoexon
exon-auto141810auto141810Theobroma cacaoexon
exon-auto141811auto141811Theobroma cacaoexon
exon-auto141812auto141812Theobroma cacaoexon
exon-auto141813auto141813Theobroma cacaoexon
exon-auto141814auto141814Theobroma cacaoexon
exon-auto141815auto141815Theobroma cacaoexon
exon-auto141816auto141816Theobroma cacaoexon
exon-auto141817auto141817Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto141818auto141818Theobroma cacaoCDS
CDS-auto141819auto141819Theobroma cacaoCDS
CDS-auto141820auto141820Theobroma cacaoCDS
CDS-auto141821auto141821Theobroma cacaoCDS
CDS-auto141822auto141822Theobroma cacaoCDS
CDS-auto141823auto141823Theobroma cacaoCDS
CDS-auto141824auto141824Theobroma cacaoCDS
CDS-auto141825auto141825Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t000800.2 ID=Tc03v2_t000800.2|Name=Tc03v2_t000800.2|organism=Theobroma cacao|type=mRNA|length=777bp
ATGGCTAAGCAATCTGCTGAAGTTGTTGTTGAAGGACTGAAGAGGATTCT
CATCAGGGAGAAAGAAGGCCTGGATCGGGAGGTTCAAGGAAAAGTTGAGA
GGCTTATTGCTGAGCTCCAAGGGAAAAGGCCTTCATTCGACCCAGATGCT
CAAAGGATCGAAGATGGCTTTGCCTTCTTCAAGGAGAACATATATGACAA
ATATCCTGAATGTTTCAGTGAACTTGCAGAGGGTCAACACCCGAGGTTTT
TGGTCTTTGCATGCTCGGATTCCCGAGTAAGCCCCTCAGTTGTTCTGAAT
TTCAAGCCAGGAGAAGCCTTCAGTGGCCGCAATATTGCTAATATGGTTCC
TCCATTTGACCAGCTGAGACACACCGAAATTGGTTCAGTCATTGAATATG
CTGTTAAAGCTCTTGAGGTACAAAACATCTTGGTCGTGGGACATAGTCGT
TGTGGTGGGATAGAGAGGCTTATGAAGCTTCCGGACGAGAGTCATACTTA
TGACTTCATAGATCAGTGGGTGCAAATTGGTTTGCCAGCAAAGATCAAGG
TCCTGGAAGAGGCTAATGATCTGCCATTTGAAGAACAATGCAGGCTGTGT
GAAAAGGAATCAGTGAATAACTCGATGGCAAATCTACTGACTTATCCATT
TGTGAGAAATGCAGTGGTGAGTGGAACTCTGACATTGAGGGGAGGTTATT
ATGATTTTGTGAATGGAACTTTTGAGCAATGGAAGATGTGCACAGAACCC
ATGCCTCCAAAGCCTATGCCTTTCTAA
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protein sequence of Tc03v2_p000800.2

>Tc03v2_p000800.2 ID=Tc03v2_p000800.2|Name=Tc03v2_p000800.2|organism=Theobroma cacao|type=polypeptide|length=259bp
MAKQSAEVVVEGLKRILIREKEGLDREVQGKVERLIAELQGKRPSFDPDA
QRIEDGFAFFKENIYDKYPECFSELAEGQHPRFLVFACSDSRVSPSVVLN
FKPGEAFSGRNIANMVPPFDQLRHTEIGSVIEYAVKALEVQNILVVGHSR
CGGIERLMKLPDESHTYDFIDQWVQIGLPAKIKVLEEANDLPFEEQCRLC
EKESVNNSMANLLTYPFVRNAVVSGTLTLRGGYYDFVNGTFEQWKMCTEP
MPPKPMPF*
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