Tc03v2_t000800.1

Overview
NameTc03v2_t000800.1
Unique NameTc03v2_t000800.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length783
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productcarbonic anhydrase 2, transcript variant X1
NoteBeta carbonic anhydrase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603899
GenbankXM_007036147.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g000800Tc03v2_g000800Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p000800.1Tc03v2_p000800.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto141790auto141790Theobroma cacaoexon
exon-auto141791auto141791Theobroma cacaoexon
exon-auto141792auto141792Theobroma cacaoexon
exon-auto141793auto141793Theobroma cacaoexon
exon-auto141794auto141794Theobroma cacaoexon
exon-auto141795auto141795Theobroma cacaoexon
exon-auto141796auto141796Theobroma cacaoexon
exon-auto141797auto141797Theobroma cacaoexon
exon-auto141798auto141798Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto141799auto141799Theobroma cacaoCDS
CDS-auto141800auto141800Theobroma cacaoCDS
CDS-auto141801auto141801Theobroma cacaoCDS
CDS-auto141802auto141802Theobroma cacaoCDS
CDS-auto141803auto141803Theobroma cacaoCDS
CDS-auto141804auto141804Theobroma cacaoCDS
CDS-auto141805auto141805Theobroma cacaoCDS
CDS-auto141806auto141806Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t000800.1 ID=Tc03v2_t000800.1|Name=Tc03v2_t000800.1|organism=Theobroma cacao|type=mRNA|length=783bp
ATGGCTAAGCAATCTGCTGAAGTTGTTGTTGAAGGACTGAAGAGGATTCT
CATCAGTTGCAGGGAGAAAGAAGGCCTGGATCGGGAGGTTCAAGGAAAAG
TTGAGAGGCTTATTGCTGAGCTCCAAGGGAAAAGGCCTTCATTCGACCCA
GATGCTCAAAGGATCGAAGATGGCTTTGCCTTCTTCAAGGAGAACATATA
TGACAAATATCCTGAATGTTTCAGTGAACTTGCAGAGGGTCAACACCCGA
GGTTTTTGGTCTTTGCATGCTCGGATTCCCGAGTAAGCCCCTCAGTTGTT
CTGAATTTCAAGCCAGGAGAAGCCTTCAGTGGCCGCAATATTGCTAATAT
GGTTCCTCCATTTGACCAGCTGAGACACACCGAAATTGGTTCAGTCATTG
AATATGCTGTTAAAGCTCTTGAGGTACAAAACATCTTGGTCGTGGGACAT
AGTCGTTGTGGTGGGATAGAGAGGCTTATGAAGCTTCCGGACGAGAGTCA
TACTTATGACTTCATAGATCAGTGGGTGCAAATTGGTTTGCCAGCAAAGA
TCAAGGTCCTGGAAGAGGCTAATGATCTGCCATTTGAAGAACAATGCAGG
CTGTGTGAAAAGGAATCAGTGAATAACTCGATGGCAAATCTACTGACTTA
TCCATTTGTGAGAAATGCAGTGGTGAGTGGAACTCTGACATTGAGGGGAG
GTTATTATGATTTTGTGAATGGAACTTTTGAGCAATGGAAGATGTGCACA
GAACCCATGCCTCCAAAGCCTATGCCTTTCTAA
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protein sequence of Tc03v2_p000800.1

>Tc03v2_p000800.1 ID=Tc03v2_p000800.1|Name=Tc03v2_p000800.1|organism=Theobroma cacao|type=polypeptide|length=261bp
MAKQSAEVVVEGLKRILISCREKEGLDREVQGKVERLIAELQGKRPSFDP
DAQRIEDGFAFFKENIYDKYPECFSELAEGQHPRFLVFACSDSRVSPSVV
LNFKPGEAFSGRNIANMVPPFDQLRHTEIGSVIEYAVKALEVQNILVVGH
SRCGGIERLMKLPDESHTYDFIDQWVQIGLPAKIKVLEEANDLPFEEQCR
LCEKESVNNSMANLLTYPFVRNAVVSGTLTLRGGYYDFVNGTFEQWKMCT
EPMPPKPMPF*
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