|
|
Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns |
| Product | cleavage and polyadenylation specificity factor subunit 6, transcript variant X1 |
| Note | RNA-binding family protein isoform 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| CDS-auto123280 | auto123280 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t023210.3 ID=Tc02v2_t023210.3|Name=Tc02v2_t023210.3|organism=Theobroma cacao|type=mRNA|length=1959bp
ATGGATGCAATGGCTGAAGAACAAATAGATTTCGGAGATGAGGAGTATGG
AGGGGGACAAAAGATGCAGTATCAGGGAAGTGGAGCCATACCTGCTCTTG
CTGATGAAGAGATGATGGGGGAAGATGATGAATATGATGATCTCTACAAC
GATGTTAATGTTGGAGAAGGCTTTCTTCAGTTGCAACGATCTGAGGCACC
ACTACAACCAGGTGGCCTGGGCAGTACTGGACTTAAAGCTCAGAGAAATG
AGGCTCCTGAACCGAGAGTTGAAGCTGGGGGTTCACAAGGGCTAAACATT
CCAGGAGTTTCAGTTCAAGGGAAGCACCCCAATGTCAGTGCCCGTTATCC
TGAGAAGGAGGAGCAGCCAGCTGTTAACAGACCAGAAATGGTATCTGGGA
GTTATCCATCTGGGTCTTCTATTTCACAGAAGGGCAGTGTTACAGAGGGG
ACCCATGATAAGCAAGTGAAAAATTTGGGTTTTCAAGGATTGACTTCAGC
ATCCAACAAGGTTGGGATTGATCCTTCTGGTGTGCCTCAAAAGATTGCCA
ATGACCCTGCTCAATCTCTAAATTCAGGTACTGGTGGTCCTCAAGGTCCT
CCACATGTGCCACCTAATCAAATGGGTACGAATGTTAATCATCCTGTGAT
GAACGAAAATCAGGTTCAGCCAGCTATAGAGAATGGTCCAACCATGCTGT
TTGTTGGAGAACTCCATTGGTGGACAACTGATGCAGAGCTTGAGAGTGTT
TTATCTCAATATGGAAGGTTGAAGGAGATTAAGTTCTTTGATGAGAAAGC
TAGTGGTAAATCCAAAGGGTATTGTCAAGTTGAGTTCTATGATCCATCTT
CTGCAGCTGTATGCAAAGAGGGAATGAATGGTTATATGTTCAATGGGAGA
GCTTGTGTTGTGGCTTTTGCTTCACCACAGACATTGAAGCAGATGGGAGC
TTCCTATATGAACAAAAACCAGGGCCAGTCTCAAGCACAGCCTCAAGGCA
GGAGGCCAAATGAAGGTTTGGGGAGAGGGGGTAATCTGAATTACCAAAGT
GGAGATGCAGGGAGGAACTACGGAAGGGGTGGCTGGGGACGGGGTGGTCA
AGGAGGAGTCAACCGAGCTGGGGGTGGAGGACTAATGAGAGGAAGGGGAG
GTGTAGGTGTAAAGAACATGGTTGGGATCTCGGCTGGAGTTGGAAATGGT
GCTAATGGTGCAGGGGCCTATGGACAAGGACCGGGTCCTGCATTTGGTGG
TCCTGCTGGTGGCATGATGCATCCACAGGGCATGATGGGAGCTGGGTTTG
ACCCAACATATATGGTTCGAGGAGGTGGTTATGGAGGTTTTCCAGGACCT
GGTTTTCCTGGCATGCTTCCTTCATTTCCAGCTGTTAATACAATGGGACT
TGCTGGTGTAGCTCCGCATGTCAATCCTGCTTTCTTTGGCCGTGGAATGG
CACCTAATGGGATGGGAATGATGGGTGCATCTGGAATGGATGGACCTCAT
GCGGGAATGTGGACTGACGCAAGCATGGGTGGGTGGGGAGGAGATGAGCA
TGGTCGCAGGACTAGAGAGTCTAGTTATGGCGGTGAAGATGGTGCTTCAG
AGTATGGGTATGGAGATGCAAATCATGAAAAAGGAAGGTCGAGTGGTGCC
TCTCGGGAAAAAGAGCGGGTTTCTGAGCGTGAGTGGTCAGGCAACTCTGA
TAGGAGGCATCGTGATGAGAAGGAACGGGACTGGGACAGGTCTGAGAGGG
AGCATAGGGAACACCGCTATAGGGAAGAAAAAGACAGCTACAGAGAGCAT
CGACATCGAGAACGTGACTTGGATTATGATGATGACTGGGATAGGGGACA
ATCTTCTTCAAGATCTCGGAGAAGGTCCCATGCAATGCCAGAAGAAGAGC
ACAGGTCTCGATCAAGGGATGTGGACTATGGGAAGAAGAGACGCCTGCCA
TCAGAATGA back to topprotein sequence of Tc02v2_p023210.3 >Tc02v2_p023210.3 ID=Tc02v2_p023210.3|Name=Tc02v2_p023210.3|organism=Theobroma cacao|type=polypeptide|length=653bp
MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYN
DVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNI
PGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEG
THDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP
PHVPPNQMGTNVNHPVMNENQVQPAIENGPTMLFVGELHWWTTDAELESV
LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGR
ACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLGRGGNLNYQS
GDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNG
ANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGP
GFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPH
AGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKGRSSGA
SREKERVSEREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREH
RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLP
SE* back to top
|