Tc02v2_t015470.1

Overview
NameTc02v2_t015470.1
Unique NameTc02v2_t015470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1587
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productmitotic checkpoint serine/threonine-protein kinase BUB1
NoteMitotic checkpoint serine/threonine-protein kinase BUB1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18608736
GenbankXM_007043568.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g015470Tc02v2_g015470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p015470.1Tc02v2_p015470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto110239auto110239Theobroma cacaoexon
exon-auto110240auto110240Theobroma cacaoexon
exon-auto110241auto110241Theobroma cacaoexon
exon-auto110242auto110242Theobroma cacaoexon
exon-auto110243auto110243Theobroma cacaoexon
exon-auto110244auto110244Theobroma cacaoexon
exon-auto110245auto110245Theobroma cacaoexon
exon-auto110246auto110246Theobroma cacaoexon
exon-auto110247auto110247Theobroma cacaoexon
exon-auto110248auto110248Theobroma cacaoexon
exon-auto110249auto110249Theobroma cacaoexon
exon-auto110250auto110250Theobroma cacaoexon
exon-auto110251auto110251Theobroma cacaoexon
exon-auto110252auto110252Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto110253auto110253Theobroma cacaoCDS
CDS-auto110254auto110254Theobroma cacaoCDS
CDS-auto110255auto110255Theobroma cacaoCDS
CDS-auto110256auto110256Theobroma cacaoCDS
CDS-auto110257auto110257Theobroma cacaoCDS
CDS-auto110258auto110258Theobroma cacaoCDS
CDS-auto110259auto110259Theobroma cacaoCDS
CDS-auto110260auto110260Theobroma cacaoCDS
CDS-auto110261auto110261Theobroma cacaoCDS
CDS-auto110262auto110262Theobroma cacaoCDS
CDS-auto110263auto110263Theobroma cacaoCDS
CDS-auto110264auto110264Theobroma cacaoCDS
CDS-auto110265auto110265Theobroma cacaoCDS
CDS-auto110266auto110266Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t015470.1 ID=Tc02v2_t015470.1|Name=Tc02v2_t015470.1|organism=Theobroma cacao|type=mRNA|length=1587bp
ATGGGTGTAATTCTCACAGAATCGAATGATTCCTCCTCTGCTCACGACCC
TCTCTTCCCATGGCTCACGTCGATAAAGAAGGCATTGGATGAATGGTACT
CAGGGAACCGCACCGGTGCAGATCTCGACAATCTTTTATCAGATTGTATC
TCTACTTTCAAGCACAATGCCAAGTACCGAAACGACCTCAGATTTCTCAA
GATTTGGTTCATTTATTTGGAAGGTAGTAAAGATTTCGAAAGTGTTTTTA
GAGAAATAGAGGAGAATGAGATTTGTATTGGACATTCTCTACTTTATGAG
TGGTATGCATATTTCCTTGAAGCCAAAGGGAAGTGGAAGGAAGCACACAC
GGTTTATCAGATTGGTATTTCAAGGAAAGCTGACCCGCTTGAGAAGCTGA
AGGGGGCACAATCCTTATTTGTTAAAAGAATGTCTGATAGGCTTAATGGT
TCCTCATTTGGGAAGATTGACGGGAGTGAACCAGCTGAGTTTGGAAAAAA
ATTTATTAATCCATGGTCCACCTTCACGATAGAAGAGCTTTCAAAGAAGA
TACATCCTCAAATTACAAAATATGATGGATACCACCTGAGTAAGAAAGTT
TACTCTGGAAAAGTAGCCTTATCTTCTTTGAAAAAATCATCGAGGAATAA
AATTATTGAGATAGGTGGAAAGAAGTATCAGATCAAGGGGTGTGCTGGTC
AGGGTGGCTTTGCTCAAGTATTTAAAGCATACATTGATAGCAATCCTGAT
GATGTTGTTGCATTAAAGATACAAAAGCCTGCTTTCCCTTGGGAATTCTA
CATGTACCGTCAACTTGACGAACGCATCTTAGACAAACAGAGATCAAACT
TTGGTTCTGCTCAGAAAATTCATATCTATTCCGACTGTAGCATACTTGTG
TGTGACTATCTATCTCACGGGACACTTCAGGATGCGATTAATTCTTATGT
GGTTACTGGCAAGTCCATGGAGGAGGTATTATGTATTTATTACACTACAG
AGATGCTTTACATGTTGGAAACTTTGCATAGGGTTGGCATCATTCATGGC
GATTTCAAGCCTGATAATCTTCTGATTCGCTATTCTAAGGATGACCTCTC
AGAAGATGGCTTTAAAGATCGAACTGGCCCTTGGCATGATCAGGGTCTTT
GCCTTGTTGACTGGGGGAGGGGGATAGACCTGCATCTTTTTCCAGACAAC
ACAGAATTTACAGGTGATTGTCGAACTTCTGGCTTTCGTTGTATTCAAAT
GCAGGAGAAAAAACCATGGACCTTCCAGGTGGACACATATGGCCTGTGTG
TTGTTGTCCATATGATGCTGCATAATACTTACATGGAAATTGAAAAGAAA
GCCTCAGATGATGATTACATTTATCTGCCAAAATCATCTTTTAAAAGATA
CTGGAACGTCAACCTATGGAAGGATCTCTTTACAAAGCTGCTTAATGTTA
GCCCAGGCAACAATGATGCAGAGTTGTTGCAGAGCTTGAGGAAGTCATTC
CTAGAATACATGTGCGATAACCCCCCGCTTGTAAACAAACTAAAGGAGTT
GCTAGTGAAACAAAGGGCTTCCTTGTGTTGTGCTTAA
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protein sequence of Tc02v2_p015470.1

>Tc02v2_p015470.1 ID=Tc02v2_p015470.1|Name=Tc02v2_p015470.1|organism=Theobroma cacao|type=polypeptide|length=529bp
MGVILTESNDSSSAHDPLFPWLTSIKKALDEWYSGNRTGADLDNLLSDCI
STFKHNAKYRNDLRFLKIWFIYLEGSKDFESVFREIEENEICIGHSLLYE
WYAYFLEAKGKWKEAHTVYQIGISRKADPLEKLKGAQSLFVKRMSDRLNG
SSFGKIDGSEPAEFGKKFINPWSTFTIEELSKKIHPQITKYDGYHLSKKV
YSGKVALSSLKKSSRNKIIEIGGKKYQIKGCAGQGGFAQVFKAYIDSNPD
DVVALKIQKPAFPWEFYMYRQLDERILDKQRSNFGSAQKIHIYSDCSILV
CDYLSHGTLQDAINSYVVTGKSMEEVLCIYYTTEMLYMLETLHRVGIIHG
DFKPDNLLIRYSKDDLSEDGFKDRTGPWHDQGLCLVDWGRGIDLHLFPDN
TEFTGDCRTSGFRCIQMQEKKPWTFQVDTYGLCVVVHMMLHNTYMEIEKK
ASDDDYIYLPKSSFKRYWNVNLWKDLFTKLLNVSPGNNDAELLQSLRKSF
LEYMCDNPPLVNKLKELLVKQRASLCCA*
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