Tc02v2_t008190.1

Overview
NameTc02v2_t008190.1
Unique NameTc02v2_t008190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1755
Properties
Property NameValue
NoteFerredoxin--nitrite reductase, chloroplastic
Model evidenceSupporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productferredoxin--nitrite reductase, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607940
GenbankXM_007042368.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g008190Tc02v2_g008190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p008190.1Tc02v2_p008190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto95459auto95459Theobroma cacaoexon
exon-auto95460auto95460Theobroma cacaoexon
exon-auto95461auto95461Theobroma cacaoexon
exon-auto95462auto95462Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto95463auto95463Theobroma cacaoCDS
CDS-auto95464auto95464Theobroma cacaoCDS
CDS-auto95465auto95465Theobroma cacaoCDS
CDS-auto95466auto95466Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t008190.1 ID=Tc02v2_t008190.1|Name=Tc02v2_t008190.1|organism=Theobroma cacao|type=mRNA|length=1755bp
ATGTCTTCTTTTTCAGTTCGTTTCCTTGCACCACAAGCATTGCAGTCTAC
TTCCTCTTCCAGGCCTAAAACCTGGGTTCTTGCCGCTCCGACGACGGCAC
CGGCATCGGTGGAAGTGGATGCAGGGAGGTTGGAGCCAAGAGTGGAAGAG
AGAGATGGGTATTTTGTGTTGAAAGAGAAGTTTAGGGAAGGTATTAACCC
TCAAGAGAAAGTGAAGATCGGGAAAGATCCCATGAAGCTTTTCAGGGAAG
GAGGGATTGAAGGACTTGCTAAGATGTCAATGGAGGAGATTGATAAGGAT
AAGACTACAAAGGATGACATTGATGTCAGGCTTAAGTGGCTTGGTTTGTT
CCATAGGAGGAAGCATCAGTATGGTAGATTCATGATGAGACTGAAGCTAC
CAAATGGTGTAACAACAAGTGCTCAAACACGATATCTAGCTAGTGTGATA
AGGAAATATGGAAAGGATGGGTGCGCTGACGTGACAACCAGGCAAAACTG
GCAAATTCGGGGAGTGGTGCTGTCTGATGTGCCACGAATTCTCAAGGGTC
TTGAAGAAATAGGCTTGACTAGTCTGCAGAGTGGCATGGACAATGTCAGA
AACCCTGTTGGCAATCCTCTCGCTGGCATTGACCCAGAAGAGATTGTCGA
TACCCGTCCTTACACCAACTTGCTATCCCAATTCATTACCGCCAATTCCC
GTGGCAATCCAACCATCACTAACTTGCCAAGGAAGTGGAATGTCTGTGTT
GTGGGGTCTCATGATCTTTATGAACATCCCCACATCAATGATCTTGCTTA
CATGCCTGCCACAAAAGATGGACGTTTTGGGTTCAATTTGCTGGTAGGTG
GGTTCTTCAGTCCCAAGCGATGCGAAGAGGCCATTCCTCTTGATGCTTGG
GTTTCGACCGATGATGTGATCCCAGTGTGTAAAGCTGTGTTAGAAGCCTA
TAGGGATCTTGGCAGTAGAGGTAACAGACAAAGGACGAGAATGATGTGGT
TGATTGATGAACTAGGCCTTGAAGTATTCAGATCAGAGATAGCCAAGAGA
ATGCCTCAAAAAGAGTTAGAAAGAGCATCTTCTGAAGATCTAGTTCAAAA
GCAATGGGAAAGGAGAGACTATCTTGGTGTCCATCCACAGAAACAAGAAG
GCTTTAGCTATGTTGGTTTTCACATTCCAGTTGGTCGAGTCCAAGCAGAT
GACATGGATGAATTAGCTCGGTTAGCCGACACATATGGCTCAGGCGAACT
CAGGCTTACAGTGGAGCAAAACATCATAATTCCAAACGTTGAGAACTGGA
AATTAGAAGCCTTGCTTAACGAGCCTCTATTGAAAGACAGGTTTTCACCG
GAACCAAGTATTCTCATGAAAGGATTAGTGGCTTGCACTGGCAACCAATT
CTGTGGACAAGCCATTATTGAGACAAAGGCTAGAGCCTTGAAGGTGACTG
AGGAGGTGGAAAGGTTAGTGTCAGTGGCCCAGCCGGTAAGGATGCACTGG
ACGGGCTGCCCTAATTCCTGCGGACAGGTTCAAGTTGCTGATATTGGTTT
CATGGGGTGCATGGCAAGGGATGAGAATGGGAAACCTTGCGAAGGGGCAG
ATGTGTTCCTGGGAGGGAGAATTGGTAGTGACTCGCATTTGGGACAACTT
TATAAGAAGGCTGTTCCTTGTAAGAACTTGGTACCTGTAGTTGCTGACAT
ATTGGTGGAACACTTCGGAGCTGTCCGAAGAGAGAGGGAAGAAGCGGAAG
ATTGA
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protein sequence of Tc02v2_p008190.1

>Tc02v2_p008190.1 ID=Tc02v2_p008190.1|Name=Tc02v2_p008190.1|organism=Theobroma cacao|type=polypeptide|length=585bp
MSSFSVRFLAPQALQSTSSSRPKTWVLAAPTTAPASVEVDAGRLEPRVEE
RDGYFVLKEKFREGINPQEKVKIGKDPMKLFREGGIEGLAKMSMEEIDKD
KTTKDDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVI
RKYGKDGCADVTTRQNWQIRGVVLSDVPRILKGLEEIGLTSLQSGMDNVR
NPVGNPLAGIDPEEIVDTRPYTNLLSQFITANSRGNPTITNLPRKWNVCV
VGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCEEAIPLDAW
VSTDDVIPVCKAVLEAYRDLGSRGNRQRTRMMWLIDELGLEVFRSEIAKR
MPQKELERASSEDLVQKQWERRDYLGVHPQKQEGFSYVGFHIPVGRVQAD
DMDELARLADTYGSGELRLTVEQNIIIPNVENWKLEALLNEPLLKDRFSP
EPSILMKGLVACTGNQFCGQAIIETKARALKVTEEVERLVSVAQPVRMHW
TGCPNSCGQVQVADIGFMGCMARDENGKPCEGADVFLGGRIGSDSHLGQL
YKKAVPCKNLVPVVADILVEHFGAVRREREEAED*
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