Tc02v2_t005910.1

Overview
NameTc02v2_t005910.1
Unique NameTc02v2_t005910.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1017
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productpolyprenol reductase 2
NotePolyprenol reductase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607676
GenbankXM_007041951.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g005910Tc02v2_g005910Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p005910.1Tc02v2_p005910.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto90565auto90565Theobroma cacaoexon
exon-auto90566auto90566Theobroma cacaoexon
exon-auto90567auto90567Theobroma cacaoexon
exon-auto90568auto90568Theobroma cacaoexon
exon-auto90569auto90569Theobroma cacaoexon
exon-auto90570auto90570Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto90571auto90571Theobroma cacaoCDS
CDS-auto90572auto90572Theobroma cacaoCDS
CDS-auto90573auto90573Theobroma cacaoCDS
CDS-auto90574auto90574Theobroma cacaoCDS
CDS-auto90575auto90575Theobroma cacaoCDS
CDS-auto90576auto90576Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t005910.1 ID=Tc02v2_t005910.1|Name=Tc02v2_t005910.1|organism=Theobroma cacao|type=mRNA|length=1017bp
ATGGAGCTTGGTCTTGTTACATTGCTGAGAGCCGCTTGGATTGCAGTTAC
TCTGCCCATTGTTATAGCTCCAATACCCAGTTCTAAGCTGAGTTCATTCC
ATCAACTTGTTTCGAAGTTTGCAAAGAGAGGGAAAACCATGCAACCATGT
TCTTGTAAATTCACTGTTCCTCATAGATTCTTCTCTCATGTCTACATGGT
GGCTGTTGTGTGGACAACCATTTTACTCCTTACAACATGGTTGTATGCGT
ATACGATGGCACCACTGACCTCCGAGTCATTTCATATTTTACATCTTGCT
AGCCACTTGACAGGAGGTTCGCATATCTTGTCATTTCATAAATCTCATTT
GACAGCACTTGAGCACAGATACAGCATCTGGCGAATTGTGCTTCTGCTTT
TGTTAATGGAAGCTCAAGTCTTGAGACGCCTTTTTGAGACATTTAATGTA
TCTAACTATAGCCCCTCAGCTCGAATGCACATATTTGGCTATCTAACTGG
CTTGTTTTACTACATAGCAGCACCACTGTCACTTTGCTGCACTCTAGCGC
CTAAGGTGTTTAACTTTACTCTGAGCCTGGTGGCCGAATTCATTGTTAAA
GGAAAGAATCAGATGCCAGCTATTGAAATTGATTGGTGTGGATCTGTAAA
TCCTCTCATGAAGCTTGGATGGAGCCAGTGGATTGGTAGTGCTATATTTC
TTTGGGGTTGGATTCATCAGTGCCGTTGTCATGCAAGTCTAGGTTCAGTG
CAAGCACATGCTGAACAAGTTGATGACTACGTAATTCCTACTGGAGATTG
GTTTGAAATTGTTTCATCTCCACACTATTTAGCTGAGATTGTCATATATG
CTGGTATGGTGGTTGCTAGTGGAGGAGGAGATCTGACCGTTTGGCTACTT
TTTGTATTTGTGGTGGCAAATTTGGGGTTTGCAGCAGCCGAAACGCATAA
GTGGTACCTTTGCAAATTTGAAAATTACCCAAGAAATCGATTTGCTATTA
TACCATTCCTCTACTAA
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protein sequence of Tc02v2_p005910.1

>Tc02v2_p005910.1 ID=Tc02v2_p005910.1|Name=Tc02v2_p005910.1|organism=Theobroma cacao|type=polypeptide|length=339bp
MELGLVTLLRAAWIAVTLPIVIAPIPSSKLSSFHQLVSKFAKRGKTMQPC
SCKFTVPHRFFSHVYMVAVVWTTILLLTTWLYAYTMAPLTSESFHILHLA
SHLTGGSHILSFHKSHLTALEHRYSIWRIVLLLLLMEAQVLRRLFETFNV
SNYSPSARMHIFGYLTGLFYYIAAPLSLCCTLAPKVFNFTLSLVAEFIVK
GKNQMPAIEIDWCGSVNPLMKLGWSQWIGSAIFLWGWIHQCRCHASLGSV
QAHAEQVDDYVIPTGDWFEIVSSPHYLAEIVIYAGMVVASGGGDLTVWLL
FVFVVANLGFAAAETHKWYLCKFENYPRNRFAIIPFLY*
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