Tc02v2_t005580.1

Overview
NameTc02v2_t005580.1
Unique NameTc02v2_t005580.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length288
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productauxin-responsive protein SAUR21
NoteAuxin-responsive protein SAUR21
Cross References
External references for this mRNA
DatabaseAccession
GeneID18607645
GenbankXM_007041909.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g005580Tc02v2_g005580Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p005580.1Tc02v2_p005580.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto90314auto90314Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto90315auto90315Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t005580.1 ID=Tc02v2_t005580.1|Name=Tc02v2_t005580.1|organism=Theobroma cacao|type=mRNA|length=288bp
ATGGGTTTCCGGTTGCCAAGAATTGTTAATGCTAAGCGGAGTCCAAAACG
GGCTCTTTCATCTTCAGAGACCACAGTGGTGCCCAAAGGCCACTTTGCTG
TTTACATTGGAGAAGCTGAAAAGAAGAGATTTGTTGTCCCAATTTCATTC
CTGAAACATCCATCCTTCCAAAATTTGTTGAGTCAAGCTGAAGAAGAGTA
CGGATTTAATCATCCTATGGGTGCTCTGACGATCCCCTGCTGCGAAGAAG
CTTTTCTTGATCTCATTTGCGGTCTGCAAAGCTCATGA
back to top

protein sequence of Tc02v2_p005580.1

>Tc02v2_p005580.1 ID=Tc02v2_p005580.1|Name=Tc02v2_p005580.1|organism=Theobroma cacao|type=polypeptide|length=96bp
MGFRLPRIVNAKRSPKRALSSSETTVVPKGHFAVYIGEAEKKRFVVPISF
LKHPSFQNLLSQAEEEYGFNHPMGALTIPCCEEAFLDLICGLQSS*
back to top