Tc01v2_t034350.1

Overview
NameTc01v2_t034350.1
Unique NameTc01v2_t034350.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1041
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcycloartenol-C-24-methyltransferase
NoteCycloartenol-C-24-methyltransferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614599
GenbankXM_018113898.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g034350Tc01v2_g034350Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p034350.1Tc01v2_p034350.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto76228auto76228Theobroma cacaoexon
exon-auto76229auto76229Theobroma cacaoexon
exon-auto76230auto76230Theobroma cacaoexon
exon-auto76231auto76231Theobroma cacaoexon
exon-auto76232auto76232Theobroma cacaoexon
exon-auto76233auto76233Theobroma cacaoexon
exon-auto76234auto76234Theobroma cacaoexon
exon-auto76235auto76235Theobroma cacaoexon
exon-auto76236auto76236Theobroma cacaoexon
exon-auto76237auto76237Theobroma cacaoexon
exon-auto76238auto76238Theobroma cacaoexon
exon-auto76239auto76239Theobroma cacaoexon
exon-auto76240auto76240Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto76241auto76241Theobroma cacaoCDS
CDS-auto76242auto76242Theobroma cacaoCDS
CDS-auto76243auto76243Theobroma cacaoCDS
CDS-auto76244auto76244Theobroma cacaoCDS
CDS-auto76245auto76245Theobroma cacaoCDS
CDS-auto76246auto76246Theobroma cacaoCDS
CDS-auto76247auto76247Theobroma cacaoCDS
CDS-auto76248auto76248Theobroma cacaoCDS
CDS-auto76249auto76249Theobroma cacaoCDS
CDS-auto76250auto76250Theobroma cacaoCDS
CDS-auto76251auto76251Theobroma cacaoCDS
CDS-auto76252auto76252Theobroma cacaoCDS
CDS-auto76253auto76253Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t034350.1 ID=Tc01v2_t034350.1|Name=Tc01v2_t034350.1|organism=Theobroma cacao|type=mRNA|length=1041bp
ATGTCGAAGGCTGGTGCATTGGATCTCGCCTCGGGTCTCGGTGGCAAGAT
TGAGAAAACCGATGTCCTCTCTGCTGTTGAAAAGTATGAGAAGTATCATG
TCTTTTATGGAGGTGAGGAGGAAGAGAGAAAAGCCAACTACACTGACATG
GTTAACAAGTACTATGATCTGGTTACCAGCTTTTATGAGTTTGGATGGGG
GGAATCTTTCCATTTTGCACCTAGATGGAATGGGGAGTCTCTTCGCGAGA
GCATAAAGCGGCATGAGCATTTTCTTGCTTTACAACTTGGCTTGAACCCT
GGACACAAGGTGTTGGATGTTGGATGTGGAATTGGTGGACCGCTGAGAGA
AATTGCTCGATTCAGCTCCACATCAGTTACAGGGTTGAACAACAATGAAT
ATCAAATAGCAAGAGGGAAGGAATTAAACTGCATTGCTGGCGTGGACAAG
AATTGCAACTTTGTGAAGGCTGATTTTATGAAGATGCCATTTCCTGACAG
CAGCTTTGATGCAGTTTATGCTATTGAAGCTACCTGCCATGCACCGGATG
CATATGGATGCTACAAGGAGATTTACAGAGTATTGAAGCCTGGTCGGTAT
TTTGCTGCTTATGAGTGGTGCATGACTGATTCTTTTGATCCCAATAACCA
TGAACACCAGAAAATTAAGGCAGAAATTGAGATTGGTGATGGTCTTCCAG
ACATCAGGTTGACCAGACAGTGCCTGGAAGCTCTAAAACAGGCTGGTTTT
GAGGTAATATGGGAGAAAGATCTTGCTGTTGACTCCCCTGTCCCTTGGTA
CTTGCCTTTAGATAAAAACCACTTCTCATTGAGCAGCTTCCGTCTAACGG
CTATTGGACGCTTCGTCACTAAAAATATGGTCAAGGCTCTAGAATTTGTG
GGATTTGCTCCAAGGGGAAGTCAAAGGGTTCAAGATTTTCTGGAGAAGGC
TGCAGAAGGGTTGGTTGAAGGTGGCAGGAAAGAGATCTTTACGCCTATGT
ATTTCTTCTTGGCCCGAAAACCACTTGCAGAGAGCCAGTAA
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protein sequence of Tc01v2_p034350.1

>Tc01v2_p034350.1 ID=Tc01v2_p034350.1|Name=Tc01v2_p034350.1|organism=Theobroma cacao|type=polypeptide|length=347bp
MSKAGALDLASGLGGKIEKTDVLSAVEKYEKYHVFYGGEEEERKANYTDM
VNKYYDLVTSFYEFGWGESFHFAPRWNGESLRESIKRHEHFLALQLGLNP
GHKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQIARGKELNCIAGVDK
NCNFVKADFMKMPFPDSSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGRY
FAAYEWCMTDSFDPNNHEHQKIKAEIEIGDGLPDIRLTRQCLEALKQAGF
EVIWEKDLAVDSPVPWYLPLDKNHFSLSSFRLTAIGRFVTKNMVKALEFV
GFAPRGSQRVQDFLEKAAEGLVEGGRKEIFTPMYFFLARKPLAESQ*
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