Tc01v2_t031710.2

Overview
NameTc01v2_t031710.2
Unique NameTc01v2_t031710.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length552
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productglutathione S-transferase zeta class, transcript variant X6
NoteGlutathione S-transferase Z1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614299
GenbankXM_018122031.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g031710Tc01v2_g031710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p031710.2Tc01v2_p031710.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto71389auto71389Theobroma cacaoexon
exon-auto71390auto71390Theobroma cacaoexon
exon-auto71391auto71391Theobroma cacaoexon
exon-auto71392auto71392Theobroma cacaoexon
exon-auto71393auto71393Theobroma cacaoexon
exon-auto71394auto71394Theobroma cacaoexon
exon-auto71395auto71395Theobroma cacaoexon
exon-auto71396auto71396Theobroma cacaoexon
exon-auto71397auto71397Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto71398auto71398Theobroma cacaoCDS
CDS-auto71399auto71399Theobroma cacaoCDS
CDS-auto71400auto71400Theobroma cacaoCDS
CDS-auto71401auto71401Theobroma cacaoCDS
CDS-auto71402auto71402Theobroma cacaoCDS
CDS-auto71403auto71403Theobroma cacaoCDS
CDS-auto71404auto71404Theobroma cacaoCDS
CDS-auto71405auto71405Theobroma cacaoCDS
CDS-auto71406auto71406Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t031710.2 ID=Tc01v2_t031710.2|Name=Tc01v2_t031710.2|organism=Theobroma cacao|type=mRNA|length=552bp
ATGGCACCGAAAGATGGTGGCGAGGCGTCTTCCAAGCTCGTTTTGTATTC
ATACTGGCAGAGCTCCTGTTCTTGGCGTGTTCGCTTCGCTTTGAACCTCA
AAGGGCTTTCATATGAGTACAAAGCGGTGAACCTTGCGAAAGGAGAGCAG
TTTACTCCAGATTTTGAGAAGTTGAACCCTCTCCATTTTGTTCCGGTTCT
AGTTGATGGTGATGTTGTAGTCTCTGATTCGTATGCAATCTTGATGTATT
TGGAGGAAAAGTATCCTCAAAGAACTCTCTTACCAGCTGATCCCCAGCAA
AAAGCCCTGAATCTTCAGAAATATCTTGAGGAAAAGGTTGGCCTAGAAGA
GCGACTTCTATTTGTTCAAACTAATATTGAAAAAGGTTTCCTTGCTCTTG
AGAAGTTGCTGAAAGACTTTGTTGGCAAATATGCCACAGGAGAAGAAGTA
TACATGGGTTTTGTCATTTGCAGGCTGATGTATTTATGGCACCTCAGATT
GCTGTGGCTACAGAACGGTTTAAGATTGACATGTCCAAGTTCCCTACTTT
AA
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protein sequence of Tc01v2_p031710.2

>Tc01v2_p031710.2 ID=Tc01v2_p031710.2|Name=Tc01v2_p031710.2|organism=Theobroma cacao|type=polypeptide|length=184bp
MAPKDGGEASSKLVLYSYWQSSCSWRVRFALNLKGLSYEYKAVNLAKGEQ
FTPDFEKLNPLHFVPVLVDGDVVVSDSYAILMYLEEKYPQRTLLPADPQQ
KALNLQKYLEEKVGLEERLLFVQTNIEKGFLALEKLLKDFVGKYATGEEV
YMGFVICRLMYLWHLRLLWLQNGLRLTCPSSLL*
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