Tc01v2_t031030.1

Overview
NameTc01v2_t031030.1
Unique NameTc01v2_t031030.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length870
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productmethylsterol monooxygenase 1-2, transcript variant X1
NoteMethylsterol monooxygenase 1-1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614230
GenbankXM_018114213.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g031030Tc01v2_g031030Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p031030.1Tc01v2_p031030.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto69884auto69884Theobroma cacaoexon
exon-auto69885auto69885Theobroma cacaoexon
exon-auto69886auto69886Theobroma cacaoexon
exon-auto69887auto69887Theobroma cacaoexon
exon-auto69888auto69888Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto69889auto69889Theobroma cacaoCDS
CDS-auto69890auto69890Theobroma cacaoCDS
CDS-auto69891auto69891Theobroma cacaoCDS
CDS-auto69892auto69892Theobroma cacaoCDS
CDS-auto69893auto69893Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t031030.1 ID=Tc01v2_t031030.1|Name=Tc01v2_t031030.1|organism=Theobroma cacao|type=mRNA|length=870bp
ATGCTTCAGTATGGGAGTCTTGAAGCAGCAGAGTTGGCTCTGGGGAGAAA
CCTAACACTGCCAGAGAAGTTGTGGTATAGTTACTCAGCTGAGAAATCAG
ACTACTATTTGTATAACCACAATTGCCTTTTCTTGTTCTTGGTGTTCTCC
TTGGTTCCTCTCCCATGTGTGTTGGTCGAGCTTTTTTGGTTCAACAACAT
GAACAAGTTCAAGCTTCAACCCAGAATCAGAAGATCGTTTTCAGAGTTGT
TTAAATGCTATAAAGATGTTATTCTCAACAAGTTCATTCTTGTTGCCGTT
CCTCTCATTGCTGTTTCCTTCCCTGCCCTAAAGTGGGTTAGGATCCGTTA
CCCTACAAGCTTGCCATTGCCATCAAAATGGGAGGTGATAAGCCAATTGG
TGGTGTATTTTCTTATCGAGGACTATGGACACTACTGGATTCATCGGTTG
CTGCATACCAAATGGGGCTTCGAAAATATCCACTACATGCACCATGAATA
CGAGGCTCCGATCGGGTTTGCGGCACCTTACGCTCACTGGGCAGAAATTC
TGATTTTGGGAATCCCGACGTATCTTGGTCCCGCCATTGTTCCATGTCAT
ATGGTCACTTTGTGGCTCTGGACGGCTCTGCGGCAGGCTGAGGCCATTGA
GACGCATAGCGGGTTCGACTTCCCATGGAGTCCTACCAAATTCATTCCCT
TTTATGGAGGTGCAGAGTATCACGATTATCATCACTTCGTTGGAGGACAA
AGCCAAAGCAATTTTGCATCCGTCTTCACCTACTGTGATTATATTTATGG
CACTGACAAGGGTTATCGTCATCACAAACGAGTCGTTCAAAAGCTTAAGG
ACAAGAAGCACCGGGAATGA
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protein sequence of Tc01v2_p031030.1

>Tc01v2_p031030.1 ID=Tc01v2_p031030.1|Name=Tc01v2_p031030.1|organism=Theobroma cacao|type=polypeptide|length=290bp
MLQYGSLEAAELALGRNLTLPEKLWYSYSAEKSDYYLYNHNCLFLFLVFS
LVPLPCVLVELFWFNNMNKFKLQPRIRRSFSELFKCYKDVILNKFILVAV
PLIAVSFPALKWVRIRYPTSLPLPSKWEVISQLVVYFLIEDYGHYWIHRL
LHTKWGFENIHYMHHEYEAPIGFAAPYAHWAEILILGIPTYLGPAIVPCH
MVTLWLWTALRQAEAIETHSGFDFPWSPTKFIPFYGGAEYHDYHHFVGGQ
SQSNFASVFTYCDYIYGTDKGYRHHKRVVQKLKDKKHRE*
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