Tc01v2_t030770.6

Overview
NameTc01v2_t030770.6
Unique NameTc01v2_t030770.6
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1098
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productcell division protein FtsY homolog, chloroplastic, transcript variant X6
NoteCell division protein FtsY homolog, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614202
GenbankXM_018129292.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030770Tc01v2_g030770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030770.6Tc01v2_p030770.6Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto69367auto69367Theobroma cacaoexon
exon-auto69368auto69368Theobroma cacaoexon
exon-auto69369auto69369Theobroma cacaoexon
exon-auto69370auto69370Theobroma cacaoexon
exon-auto69371auto69371Theobroma cacaoexon
exon-auto69372auto69372Theobroma cacaoexon
exon-auto69373auto69373Theobroma cacaoexon
exon-auto69374auto69374Theobroma cacaoexon
exon-auto69375auto69375Theobroma cacaoexon
exon-auto69376auto69376Theobroma cacaoexon
exon-auto69377auto69377Theobroma cacaoexon
exon-auto69378auto69378Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto69379auto69379Theobroma cacaoCDS
CDS-auto69380auto69380Theobroma cacaoCDS
CDS-auto69381auto69381Theobroma cacaoCDS
CDS-auto69382auto69382Theobroma cacaoCDS
CDS-auto69383auto69383Theobroma cacaoCDS
CDS-auto69384auto69384Theobroma cacaoCDS
CDS-auto69385auto69385Theobroma cacaoCDS
CDS-auto69386auto69386Theobroma cacaoCDS
CDS-auto69387auto69387Theobroma cacaoCDS
CDS-auto69388auto69388Theobroma cacaoCDS
CDS-auto69389auto69389Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030770.6 ID=Tc01v2_t030770.6|Name=Tc01v2_t030770.6|organism=Theobroma cacao|type=mRNA|length=1098bp
ATGGCTTTCCCTACTCAGCTCTCACTCATTTCCAAACCCTCACCGCTCTT
TTCGAACTTACCTCGAACCCGGTTCAATCCATCCACAACAGCCAGACCAA
CCGCTTCCCGTTTCAAATGCCTGGCGAGTCAGACCGGGTTCTTCACTCGA
CTCGGTCGGTTAATCAAGGAAAAGGCCAAGAGTGACGTTGAAAAGATCTT
CTCAGGGTTCTCCAAGACCAGAGACAACCTCGCCGTGATCGACGAACTCT
TGTTATACTGGAACCTCGCTGACACTGATCGCGTCCTCGACGAACTCGAA
GAGGCTTTATTGGTATCTGATTTTGGGCCAAGAATTACAATTAAAATAGT
GGAGAGCTTGCGGGAGGATATACTAAGTGGAAAACTTAAATCAGGAAGTG
AAATAAAGGATGCATTGAAGAAGTGTGTGTTGGATCTCTTGACAAAGAAG
GGGAGTAAGACCGAGCTTCGTCTTGGATTCAGGAAGCCAGCTGTGATCAT
GATTGTTGGCGTTAATGGAGGTGGCAAGACAACATCACTTGGAAAGCTGG
CTTATAGATTAAAGAATGAAGGGGCAAAGATATTGATGGCAGCAGGTGAC
ACATTCAGAGCAGCTGCTAGTGATCAACTAGAGATATGGGCTGAGAGAAC
TGGTTGTGAGATTGTTGTAGCTGAAAAGGAGAATGCCAAAGCATCATCAG
TGCTTTCGCAGGCTGTCAAAAGAGGTAAGGAGCAAGGTTTTGATATTGTC
TTGTGTGACACATCTGGACGTCTTCACACTAATTTCAGCTTGATGGAAGA
GTTGATAGCCTGTAAGAAGGCTGTGGGAAAAGTTATTCCTGGTGCACCCA
ATGAGATCCTACTAGTTCTTGACGGGAACACTGGATTGAATATGCTTCCA
CAAGCAAGAGAGTTCAATGAGGTAGTTGGAATAACTGGTTTTGTTTTGAC
AAAACTTGATGGTTCTGCTAGAGGTGGCTGTGTGGTCAGCGTGGTTGATG
AGCTTGGCATTCCTGTGAAGTTTCTAGGTGTTGGTGAAGGTCTCGAAGAC
CTTCAACCTTTTGATGCAGAGGCATTTGTTAATGCCATATTTCCGTGA
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protein sequence of Tc01v2_p030770.6

>Tc01v2_p030770.6 ID=Tc01v2_p030770.6|Name=Tc01v2_p030770.6|organism=Theobroma cacao|type=polypeptide|length=366bp
MAFPTQLSLISKPSPLFSNLPRTRFNPSTTARPTASRFKCLASQTGFFTR
LGRLIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELE
EALLVSDFGPRITIKIVESLREDILSGKLKSGSEIKDALKKCVLDLLTKK
GSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGD
TFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGKEQGFDIV
LCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLP
QAREFNEVVGITGFVLTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLED
LQPFDAEAFVNAIFP*
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