Tc01v2_t030770.3

Overview
NameTc01v2_t030770.3
Unique NameTc01v2_t030770.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1299
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Productcell division protein FtsY homolog, chloroplastic, transcript variant X1
NoteCell division protein FtsY homolog, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614202
GenbankXM_018129269.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030770Tc01v2_g030770Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030770.3Tc01v2_p030770.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto69291auto69291Theobroma cacaoexon
exon-auto69292auto69292Theobroma cacaoexon
exon-auto69293auto69293Theobroma cacaoexon
exon-auto69294auto69294Theobroma cacaoexon
exon-auto69295auto69295Theobroma cacaoexon
exon-auto69296auto69296Theobroma cacaoexon
exon-auto69297auto69297Theobroma cacaoexon
exon-auto69298auto69298Theobroma cacaoexon
exon-auto69299auto69299Theobroma cacaoexon
exon-auto69300auto69300Theobroma cacaoexon
exon-auto69301auto69301Theobroma cacaoexon
exon-auto69302auto69302Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto69303auto69303Theobroma cacaoCDS
CDS-auto69304auto69304Theobroma cacaoCDS
CDS-auto69305auto69305Theobroma cacaoCDS
CDS-auto69306auto69306Theobroma cacaoCDS
CDS-auto69307auto69307Theobroma cacaoCDS
CDS-auto69308auto69308Theobroma cacaoCDS
CDS-auto69309auto69309Theobroma cacaoCDS
CDS-auto69310auto69310Theobroma cacaoCDS
CDS-auto69311auto69311Theobroma cacaoCDS
CDS-auto69312auto69312Theobroma cacaoCDS
CDS-auto69313auto69313Theobroma cacaoCDS
CDS-auto69314auto69314Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030770.3 ID=Tc01v2_t030770.3|Name=Tc01v2_t030770.3|organism=Theobroma cacao|type=mRNA|length=1299bp
ATGGCTTTCCCTACTCAGCTCTCACTCATTTCCAAACCCTCACCGCTCTT
TTCGAACTTACCTCGAACCCGGTTCAATCCATCCACAACAGCCAGACCAA
CCGCTTCCCGTTTCAAATGCCTGGCGAGTCAGACCGGGTTCTTCACTCGA
CTCGGTCGGTTAATCAAGGAAAAGGCCAAGAGTGACGTTGAAAAGATCTT
CTCAGGGTTCTCCAAGACCAGAGACAACCTCGCCGTGATCGACGAACTCT
TGTTATACTGGAACCTCGCTGACACTGATCGCGTCCTCGACGAACTCGAA
GAGGCTTTATTGGTATCTGATTTTGGGCCAAGAATTACAATTAAAATAGT
GGAGAGCTTGCGGGAGGATATACTAAGTGGAAAACTTAAATCAGGAAGTG
AAATAAAGGATGCATTGAAGAAGTGTGTGTTGGATCTCTTGACAAAGAAG
GGGAGTAAGACCGAGCTTCGTCTTGGATTCAGGAAGCCAGCTGTGATCAT
GATTGTTGGCGTTAATGGAGGTGGCAAGACAACATCACTTGGAAAGCTGG
CTTATAGATTAAAGAATGAAGGGGCAAAGATATTGATGGCAGCAGGTGAC
ACATTCAGAGCAGCTGCTAGTGATCAACTAGAGATATGGGCTGAGAGAAC
TGGTTGTGAGATTGTTGTAGCTGAAAAGGAGAATGCCAAAGCATCATCAG
TGCTTTCGCAGGCTGTCAAAAGAGGTAAGGAGCAAGGTTTTGATATTGTC
TTGTGTGACACATCTGGACGTCTTCACACTAATTTCAGCTTGATGGAAGA
GTTGATAGCCTGTAAGAAGGCTGTGGGAAAAGTTATTCCTGGTGCACCCA
ATGAGATCCTACTAGTTCTTGACGGGAACACTGGATTGAATATGCTTCCA
CAAGCAAGAGAGTTCAATGAGGTAGTTGGAATAACTGGTTTTGTTTTGAC
AAAACTTGATGGTTCTGCTAGAGGTGGCTGTGTGGTCAGCGTGGTTGATG
AGCTTGGCATTCCTGTGAAGTTTCTAGGTGTTGGTGAAGGTCTCGAAGAC
CTTCAACCTTTTGATGCAGAGGCATTTGTTAATGCCATATTTCCGCTTCG
AGATGCATGTTGTTGTAAAAGGCTCAGTCACAAGAGTACTTGTTGGCCAG
CAAGTGGGATTTACATAGTGCAGATGTGTCAAAAGGCTTCATCGAGCATT
GTTATTATGCAAAATTTTCCTCTGTACATTATTTTTCTCTCGTGTGTTTT
AACTTGCACAGATGATAATTGGTGTAAAGGGCCATGGATCTTGTCTTGA
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protein sequence of Tc01v2_p030770.3

>Tc01v2_p030770.3 ID=Tc01v2_p030770.3|Name=Tc01v2_p030770.3|organism=Theobroma cacao|type=polypeptide|length=433bp
MAFPTQLSLISKPSPLFSNLPRTRFNPSTTARPTASRFKCLASQTGFFTR
LGRLIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDRVLDELE
EALLVSDFGPRITIKIVESLREDILSGKLKSGSEIKDALKKCVLDLLTKK
GSKTELRLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGD
TFRAAASDQLEIWAERTGCEIVVAEKENAKASSVLSQAVKRGKEQGFDIV
LCDTSGRLHTNFSLMEELIACKKAVGKVIPGAPNEILLVLDGNTGLNMLP
QAREFNEVVGITGFVLTKLDGSARGGCVVSVVDELGIPVKFLGVGEGLED
LQPFDAEAFVNAIFPLRDACCCKRLSHKSTCWPASGIYIVQMCQKASSSI
VIMQNFPLYIIFLSCVLTCTDDNWCKGPWILS*
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