Tc01v2_t030330.1

Overview
NameTc01v2_t030330.1
Unique NameTc01v2_t030330.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1476
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productprobable serine/threonine-protein kinase At5g41260
NoteProbable serine/threonine-protein kinase At5g41260
Cross References
External references for this mRNA
DatabaseAccession
GeneID18614153
GenbankXM_018129176.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g030330Tc01v2_g030330Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p030330.1Tc01v2_p030330.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto68280auto68280Theobroma cacaoexon
exon-auto68281auto68281Theobroma cacaoexon
exon-auto68282auto68282Theobroma cacaoexon
exon-auto68283auto68283Theobroma cacaoexon
exon-auto68284auto68284Theobroma cacaoexon
exon-auto68285auto68285Theobroma cacaoexon
exon-auto68286auto68286Theobroma cacaoexon
exon-auto68287auto68287Theobroma cacaoexon
exon-auto68288auto68288Theobroma cacaoexon
exon-auto68289auto68289Theobroma cacaoexon
exon-auto68290auto68290Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto68291auto68291Theobroma cacaoCDS
CDS-auto68292auto68292Theobroma cacaoCDS
CDS-auto68293auto68293Theobroma cacaoCDS
CDS-auto68294auto68294Theobroma cacaoCDS
CDS-auto68295auto68295Theobroma cacaoCDS
CDS-auto68296auto68296Theobroma cacaoCDS
CDS-auto68297auto68297Theobroma cacaoCDS
CDS-auto68298auto68298Theobroma cacaoCDS
CDS-auto68299auto68299Theobroma cacaoCDS
CDS-auto68300auto68300Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t030330.1 ID=Tc01v2_t030330.1|Name=Tc01v2_t030330.1|organism=Theobroma cacao|type=mRNA|length=1476bp
ATGGGGTGTCAGTGCTCTAAGTTAACACCATGTTGCTGGGATTCACAGTT
CAAAGCAGCAGTGTTAGAAGCCCCTGATGTTGAGAATGAGGAGAAGAGCG
AGGTTGATCACTTGCCTGTGTTTCGTGAGTTCACGTTGGAGCAACTCAAG
AATGCAACATCTGGATTTGCGGTGGAGAATATCGTTTCTGAGCACGGTGA
GAAGGCTCCTAATGTTGTTTATAAAGGGAAGTTGGAGAATCAGAGGAGAA
TTGCTGTTAAACGTTTCAACAGGATGGCTTGGCCTGATTCGCGACAATTT
TTGGAGGAAGCAAGATCAGTTGGTCAGCTACGCAACAATAGATTGGCAAA
TTTGCTTGGCTGTTGTTGTGAAGGTGATGAGCGGTTGCTTGTGGCAGAGT
ACATGCCCAATGAGACACTTGCAAAACACCTTTTTCATTGGGAAACACAA
CCAATGAAATGGGCCATGCGGTTAAGGGTTGTACTCCATCTTGCACAAGC
TTTAGAATACTGCACAAACAAAGGGCGTGCGCTATATCACGATCTCAATG
CTTACAGAGTTTTATTTGATGAAGATGAAAATCCAAGACTTTCAACCTTC
GGTCTGATGAAAAACAGTAGAGATGGAAAAAGCTACAGTACAAATTTGGC
ATTTACTCCTCCTGAATATTTGAGAACGGGAAGAGTTACATCAGAAAGTG
TAATATATAGCTTTGGCACTCTTCTGCTTGATCTTCTCAGTGGAAAACAT
ATCCCTCCTAGCCATGCCCTTGACTTGATACGAGACAGAAATCTTCAGAT
GTTAACTGATTCCTGCTTGGAAGGGCAGTTTTCTGATACTGATGGAATGG
AGCTAGTTCGTTTGGCTTCTAGATGTTTGCAGTATGAACCCAGAGAGCGG
CCGAATCCTAAATCTTTAGTTGCTGCTTTGACACCCCTTCAGAAGGAAAC
TGAGGTTCCTTCACATGTCTTAATGGGTATCCAAAACAGTGCTTCCTTCA
CTCCTCTATCCCCAGTTGCAGAGGCTTGCTCAAGAGGGGACTTGACTGCT
ATACATGAGATCTTAGAGAAACTTGGATACAAAGATGATGAAGGAGTAGC
AAATGAGCTATCCTTCCAAATGTGGACTGACCAAATGCAGGAAACCTTGA
ATTCAAAGAAAAAGGGTGATACTGCTTTCAGGCAGAAAGACTTTAAAGAA
GCAATTGAGTGTTACACTCAGTTCATTGATGTTGGTACCATGGTGTCTCC
GACTGTTTTTGCACGGCGTAGCTTGTGTTATCTCATTAATGACATGCCTC
AAGAAGCTCTAAATGATGCAATGCAAGCGCAAGTCATTTCCCCTGTATGG
CACATAGCTTCCTATCTTCAGGCTACTGCACTTGCTGCTCTTGGAATGGA
GAATGAAGCACAAACAGCACTTAAGGAGGGTGCAACTCTTGAAGCCAAGA
GAAGCTCAGCAGCTGGGCAAAAGTAA
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protein sequence of Tc01v2_p030330.1

>Tc01v2_p030330.1 ID=Tc01v2_p030330.1|Name=Tc01v2_p030330.1|organism=Theobroma cacao|type=polypeptide|length=492bp
MGCQCSKLTPCCWDSQFKAAVLEAPDVENEEKSEVDHLPVFREFTLEQLK
NATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDSRQF
LEEARSVGQLRNNRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQ
PMKWAMRLRVVLHLAQALEYCTNKGRALYHDLNAYRVLFDEDENPRLSTF
GLMKNSRDGKSYSTNLAFTPPEYLRTGRVTSESVIYSFGTLLLDLLSGKH
IPPSHALDLIRDRNLQMLTDSCLEGQFSDTDGMELVRLASRCLQYEPRER
PNPKSLVAALTPLQKETEVPSHVLMGIQNSASFTPLSPVAEACSRGDLTA
IHEILEKLGYKDDEGVANELSFQMWTDQMQETLNSKKKGDTAFRQKDFKE
AIECYTQFIDVGTMVSPTVFARRSLCYLINDMPQEALNDAMQAQVISPVW
HIASYLQATALAALGMENEAQTALKEGATLEAKRSSAAGQK*
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