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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns |
Product | protein translocase subunit SECA1, chloroplastic |
Note | Protein translocase subunit SECA1, chloroplastic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t027200.1 ID=Tc01v2_t027200.1|Name=Tc01v2_t027200.1|organism=Theobroma cacao|type=mRNA|length=3075bp ATGGCAGCACCCTTCTTCGACTCCACTCTGGTAAACCACCACTCGCCCTC TGTTTCACCATTTGCTTCCAAATTTATCTTCAACTACAGAAACAAAAACT ACCCTCCAATTCTCCATGCGGGTTCCTCGTTCTTTACTGGGAAGTCCCTT AGAGTGGCTGAACTTGGAGCGGGAACACCTAGATTGGGAAGTTGGAGGAG GCGGAGGATGGGTGTTAGGGCTTCATTGGGAGGTCTTTTGGGTGGGATTT TCAAAGGTAATGATACTGGAGAGTCCACCAGGCAGCAATACGCGGGGACT GTGACGGCTATTAACAGATTGGAATCGGAGATGGCTGCGTTAACTGATGC AGAGCTGAGGGAAAAGACTTTTGCTTTGAAGGAACGTGCCTCTCAAGGCG AATCTTTGGACTCTCTTTTGCCTGAGGCATTTGCTGTTGTAAGAGAGGCC TCCAAGAGGGTCCTTGGCCTCCGTCCCTTTGATGTCCAACTGATAGGTGG CATGGTTCTTCATAAGGGAGAAATAGCTGAAATGAGAACTGGAGAAGGAA AGACCCTTGTTGCTGTCTTACCAGCTTATTTGAATGCATTAAGTGGGAAA GGAGTTCATGTGGTTACCGTCAATGATTATCTGGCCAGACGTGATTGTGA GTGGGTTGGTCAAGTTCCTCGCTTTCTTGGGTTGAAGGTTGGACTAATAC AACAGAACATGACAAGTGAACAGAGAAGGGAAAATTACTTGTGTGACATC ACTTATGTCACCAATAGTGAGCTAGGTTTTGATTACTTGAGAGACAATCT TGCCACGAGTGTTGAGGAGCTTGTTTTGAGGGATTTCAATTATTGTATCA TAGATGAGGTCGATTCCATCCTTATTGATGAAGCAAGAACACCTCTTATC ATATCTGGGACTGCCGAAAAACCTAGTGATCAGTATTATAAAGCAGCAAA AATAGCTGCTGCCTTTGAACGAGATATACATTATACCGTAGATGAGAAGC AGAAAACTGTTCTTCTTACAGAACAGGGTTATGAAGATGCTGAAGAAATT CTGGATGTGAAAGATTTGTATGATCCACGGGAACAATGGGCATCTTTTGT TTTGAATGCTATTAAAGCAAAGGAATTGTTTCTTAGAGATGTAAATTATA TTATCCGTGGCCAGGAGGTGCTTATTGTAGATGAATTTACTGGTCGAGTT ATGCAGGGGAGGCGATGGAGTGATGGACTTCATCAAGCAGTTGAAGCAAA AGAGGGTTTACCTATTCAAAATGAAACTATAACTCTGGCCTCAATCAGTT ACCAGAACTTTTTTCTCCAGTTTCCAAAACTTTGTGGAATGACTGGCACT GCAGCAACTGAAAGCACAGAATTTGAGAGCATATACAAGCTTAAAGTTAC GATTGTCCCCACAAACAAGCCCATGATTAGAAAGGATGAGTCTGATGTAG TTTTCAGAGCAACTAATGGAAAATGGCAGGCCGTTGTTGTAGAAATTTCT AGAATGAATAAGACAGGTTGTCCAGTACTTGTTGGCACAACAAGTGTTGA GCAAAGTGACTCATTGTCAGAGCAATTGCAAGAAGCAGGAATTTCCCATG AGGTTCTCAATGCGAAACCAGAGAATGTAGAAAGAGAAGCAGAGATTGTA GCACAGAGCGGTCGTCTAGGGGCAGTGACTATTGCTACCAATATGGCTGG TCGTGGAACAGACATAATCCTTGGTGGCAATGCAGAATTTATGGCCAGGC TGAAGCTACGTGAGATGCTAATGCCAAGAGTTGTTAAGCCAGCTGAGGGA GTCTTTGTCTCAGTGAAGAAACCTCCTCCTATGAAGACATGGAAGGTGAA TGAGAAGTTATTCCCTTGCAAGCTATCCAGCAAGAATTCCAAGTTAGCCG AGGAAGCTGTAGAGTTGGCTGTCAAAACTTGGGGCAAGAAATCTTTAAGT GAGCTGGAAGCTGAGGAGCGCCTGTCTTATTCTTGTGAAAAGGGCCCTGC TGAGGATGAAGTTATTGCCAAGCTGCGAAGTGCGTTTTTAGAAATTGTAA AGGAATATAAGGCCTACACTGAGGAAGAGAGGAAGCAGGTTGTGGCAGCA GGTGGGCTTCATGTGGTGGGGACAGAACGTCATGAGTCACGGCGAATAGA CAATCAGCTGCGTGGCCGAAGTGGCAGGCAAGGGGATCCTGGAAGTTCTC GCTTTTTTCTTAGTCTAGAAGATAACATCTTTCGTATTTTTGGGGGAGAC AGAATTCAGGGCTTGATGAGAGCTTTCAGAGTTGAAGACCTACCAATTGA ATCCAAGATGTTGACTAAAGCACTTGATGAAGCTCAGCGCAAAGTGGAAA ACTACTTTTTTGATATTCGTAAACAATTGTTTGAGTATGATGAGGTCTTG AACAGTCAAAGGGACCGTGTCTATACAGAGAGAAGACGGGCCCTTATGTC CGACAATCTGCAATCTCTTATTATTGAATATGCTGAATTGACAATGGATG ACATCTTAGAGGCGAATATTGGTCCGGATGCTTCAAAGGAAAGCTGGGAT CTTGAAAAGCTCATTGCAAAACTTCAACAGTACTGCTACCTGTTGAATGA TCTGACCCCAGATGTATTGAGGAGCCAGTGTTCAAGTTATGAGGAATTAC AGGATTACCTTCGTCTTCGTGGTCGTGAAGCATATTTGCAGAAAAGGGAT ACCATGGAGAAGCAAGCAGAAGGGTTGATGAAGGAAGCTGAAAGATTCTT AATTTTGAGCAATATTGATCGCCTGTGGAAAGAACATTTGCAAGCTCTCA AGTTTGTACAACAAGCCGTAGGCTTACGTGGATATGCTCAGCGTGATCCA CTGATCGAGTATAAGCTTGAAGGCTATAATCTCTTCTTGGATATGATGGC ACAGATAAGACGAAATGTAATATATTCAATATATCAGTTCCAACCAGTGA TGGTAAAGAAGGATCAGGAGAAGTCGGATAAAGTTGTTACAAATGGTAGT AGTAATCAGAGACCTAAACCAGTTGGTGCAGTTGAGTCATCTTCGTCAGC TGCGAGCCCCCAAGCCAGCGCCTAA back to topprotein sequence of Tc01v2_p027200.1 >Tc01v2_p027200.1 ID=Tc01v2_p027200.1|Name=Tc01v2_p027200.1|organism=Theobroma cacao|type=polypeptide|length=1025bp
MAAPFFDSTLVNHHSPSVSPFASKFIFNYRNKNYPPILHAGSSFFTGKSL RVAELGAGTPRLGSWRRRRMGVRASLGGLLGGIFKGNDTGESTRQQYAGT VTAINRLESEMAALTDAELREKTFALKERASQGESLDSLLPEAFAVVREA SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLNALSGK GVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSEQRRENYLCDI TYVTNSELGFDYLRDNLATSVEELVLRDFNYCIIDEVDSILIDEARTPLI ISGTAEKPSDQYYKAAKIAAAFERDIHYTVDEKQKTVLLTEQGYEDAEEI LDVKDLYDPREQWASFVLNAIKAKELFLRDVNYIIRGQEVLIVDEFTGRV MQGRRWSDGLHQAVEAKEGLPIQNETITLASISYQNFFLQFPKLCGMTGT AATESTEFESIYKLKVTIVPTNKPMIRKDESDVVFRATNGKWQAVVVEIS RMNKTGCPVLVGTTSVEQSDSLSEQLQEAGISHEVLNAKPENVEREAEIV AQSGRLGAVTIATNMAGRGTDIILGGNAEFMARLKLREMLMPRVVKPAEG VFVSVKKPPPMKTWKVNEKLFPCKLSSKNSKLAEEAVELAVKTWGKKSLS ELEAEERLSYSCEKGPAEDEVIAKLRSAFLEIVKEYKAYTEEERKQVVAA GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGD RIQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEYDEVL NSQRDRVYTERRRALMSDNLQSLIIEYAELTMDDILEANIGPDASKESWD LEKLIAKLQQYCYLLNDLTPDVLRSQCSSYEELQDYLRLRGREAYLQKRD TMEKQAEGLMKEAERFLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDP LIEYKLEGYNLFLDMMAQIRRNVIYSIYQFQPVMVKKDQEKSDKVVTNGS SNQRPKPVGAVESSSSAASPQASA* back to top
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