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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 5 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns |
| Product | protein TRANSPORT INHIBITOR RESPONSE 1, transcript variant X1 |
| Note | Protein TRANSPORT INHIBITOR RESPONSE 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t024290.1 ID=Tc01v2_t024290.1|Name=Tc01v2_t024290.1|organism=Theobroma cacao|type=mRNA|length=1764bp
ATGCAGAAGAAAATGGCGTATTCGTTCCCAGATGAGGTGCTGGAGCATGT
CTTCTCGTTCATACAATCAGATAAAGACCGAAACGCGGTATCGATGGTGT
GCAAATCGTGGTACGAGATCGAACGGTGGTGTCGGAGGAAGATATTCATC
GGGAACTGTTACGCTGTGAGCCCTAGGATTGTGATCAGACGGTTCCCGGA
AATTAGATCCGTCGAACTGAAAGGGAAACCGCACTTTGCGGATTTCAATC
TGGTACCGGAAGGTTGGGGTGGTTACATCCTTCCGTGGATCGTGGAGATG
GCCGGCGCCTATCCATGGCTCGAAGAGATTCGGCTTAAACGGATGGTCGT
CACGGATGAAAGTTTGGAGCTTATTGCTAAGTCGTTTAAGAATTTCAAAG
TGTTGGTGCTTTCTTTTTGCGAAGGGTTCTCAACTGATGGACTCGCTGCC
ATTGCTGCTAGTTGCAAGAATCTGAAAGAGCTGGACTTGCGAGAGAGTGA
AGTGGATGATTTGAGTGGGCATTGGCTCAGCCATTTTCCTGAGACGTACA
CATCCCTGGTGTCTCTTAATATTTCTTGCTTAGGATCTGATGAAGTTAGC
TTCTCAGCCTTAGAGCGTTTGGTAGGTAGATGTCCCAACCTGAGGACGCT
TCAGCTCAACCGTGCAGTGCCTCTTGATAAAATTGCCACTATATTACGTC
GTGCACCACAGCTTGTTGAATTTGGCACTGGTACCTATGCAGCTGAGCTT
CGACCAGATGTCTTCTCAAATTTGGCTGGAGCTTTTTCTAGTTGCAAAGA
ACTGAGGAGCTTGTCTGGGTTTTGGGATGTGGTCCCAGCTTACCTTCCAG
CTATTTACTCTGTCTGTTCTAGAATATCGTCATTAAACTTGAGCTACGCT
ACTATACAAAGTCATGATCTTATAAAGCTTGTATGCCACTGTCCAAGTTT
GCAGCGCCTATTGGTACTTGATTACATTGAAGATAGTGGCCTTGAAGCAC
TTGCATCTAGTTGCAAGGACCTACAGGAATTACGGGTGTTTCCATCTGAT
CCATTTGGTGCAGAACCAAATGTATCCTTGACAGAACAGGGCCTTGTCGC
CGTTTCTTTGGGTTGTCCTAAGCTGCAGTCAGTTTTGTACTTCTGCCACC
AAATGACTAATTCTGCCTTGGTCAATATTGCCCAGAACCGTCCAAACTTG
ACCCGTTTTCGACTTTGTATAATTGCGCCAAGAAAACCTGATTATGTGAC
CCTTGAGCCACTTGATGTTGGTTTTGGAGCCATTGTACAGCATTGCAAGG
ATCTCAGGCGCCTTTCCCTTTCTGGTCTTCTCACTGATCGTGTGTTTGAA
TATATTGGGACATATGCTAAAAAGCTAGAGATGCTGTCTGTGGCTTTTGC
AGGAGATAGTGATTTGGGACTCCATCATGTGCTTTCTGGGTGTGAAAGCC
TCCGGAAACTGGAGATTAGGGACTGTTCCTTTGGGGACAAGGCTCTTTTG
GCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTG
CTCTGTGAGTTTCGGAGCATGTAAGCTGCTAGGTCAGAAGATGCCCAGGT
TGAATGTGGAAGTTATAGATGAGAGGGGACCTCCAGATTCAAGACCAGAA
AGCTGCCCAGTTGAGAAGCTCTACATATATAGGTCTGTTGCTGGGCCAAG
ATTTGACATGCCTCCATTTGTTTGGACGATGGATGATGAAGATTCTGCAT
TGAGGCTTTCTTGA back to topprotein sequence of Tc01v2_p024290.1 >Tc01v2_p024290.1 ID=Tc01v2_p024290.1|Name=Tc01v2_p024290.1|organism=Theobroma cacao|type=polypeptide|length=588bp
MQKKMAYSFPDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKIFI
GNCYAVSPRIVIRRFPEIRSVELKGKPHFADFNLVPEGWGGYILPWIVEM
AGAYPWLEEIRLKRMVVTDESLELIAKSFKNFKVLVLSFCEGFSTDGLAA
IAASCKNLKELDLRESEVDDLSGHWLSHFPETYTSLVSLNISCLGSDEVS
FSALERLVGRCPNLRTLQLNRAVPLDKIATILRRAPQLVEFGTGTYAAEL
RPDVFSNLAGAFSSCKELRSLSGFWDVVPAYLPAIYSVCSRISSLNLSYA
TIQSHDLIKLVCHCPSLQRLLVLDYIEDSGLEALASSCKDLQELRVFPSD
PFGAEPNVSLTEQGLVAVSLGCPKLQSVLYFCHQMTNSALVNIAQNRPNL
TRFRLCIIAPRKPDYVTLEPLDVGFGAIVQHCKDLRRLSLSGLLTDRVFE
YIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCESLRKLEIRDCSFGDKALL
ANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGPPDSRPE
SCPVEKLYIYRSVAGPRFDMPPFVWTMDDEDSALRLS* back to top
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