Tc01v2_t023890.1

Overview
NameTc01v2_t023890.1
Unique NameTc01v2_t023890.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length453
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Producthistidine-containing phosphotransfer protein 5
NoteHistidine-containing phosphotransfer protein 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613434
GenbankXM_007050658.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g023890Tc01v2_g023890Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p023890.1Tc01v2_p023890.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto53507auto53507Theobroma cacaoexon
exon-auto53508auto53508Theobroma cacaoexon
exon-auto53509auto53509Theobroma cacaoexon
exon-auto53510auto53510Theobroma cacaoexon
exon-auto53511auto53511Theobroma cacaoexon
exon-auto53512auto53512Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto53513auto53513Theobroma cacaoCDS
CDS-auto53514auto53514Theobroma cacaoCDS
CDS-auto53515auto53515Theobroma cacaoCDS
CDS-auto53516auto53516Theobroma cacaoCDS
CDS-auto53517auto53517Theobroma cacaoCDS
CDS-auto53518auto53518Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t023890.1 ID=Tc01v2_t023890.1|Name=Tc01v2_t023890.1|organism=Theobroma cacao|type=mRNA|length=453bp
ATGGATATTGTCAGTCAGTTGCAGAGACAGTTTATTGACTATTCTGCATC
TCTGCATCATGAGGGATTTGTGGATGATCAGTTTACTCAGCTCCAAAAAC
TGCAAGATGAAAACAGCCCCGATTTTGTGGTTGAGGTTGCCTCTCTTTTC
TTTGAAGATTGTGAGAAGCTTATTAACAATATGGCCAGAGCTTTAGAGCA
ACAACAAGGTGTGGATTTTAAGCAAGTAGATGCTAGCGTCCATCAGCTAA
AGGGTAGTAGTTCCAGCATAGGTGCAGTGAGAGTTAAAAATGTATGCATT
AGCTTTCGAAGTTTTTGCGAAGCCCAAAACCGTGAAGGGTGTTTGAGATG
CCTGCAACAGGTTACTCATGAATACTCCCTGCTGAAGAACAAGCTTCAAA
CTTTATTTAGGCTGGAGCAACAGCTTCTTGCAGCAGGTGGATCAATTAAA
TAA
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protein sequence of Tc01v2_p023890.1

>Tc01v2_p023890.1 ID=Tc01v2_p023890.1|Name=Tc01v2_p023890.1|organism=Theobroma cacao|type=polypeptide|length=151bp
MDIVSQLQRQFIDYSASLHHEGFVDDQFTQLQKLQDENSPDFVVEVASLF
FEDCEKLINNMARALEQQQGVDFKQVDASVHQLKGSSSSIGAVRVKNVCI
SFRSFCEAQNREGCLRCLQQVTHEYSLLKNKLQTLFRLEQQLLAAGGSIK
*
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