Tc01v2_t023060.1

Overview
NameTc01v2_t023060.1
Unique NameTc01v2_t023060.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length615
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productphotosystem I reaction center subunit II, chloroplastic
NotePhotosystem I reaction center subunit II, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613337
GenbankXM_007050523.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g023060Tc01v2_g023060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p023060.1Tc01v2_p023060.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto51839auto51839Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto51840auto51840Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t023060.1 ID=Tc01v2_t023060.1|Name=Tc01v2_t023060.1|organism=Theobroma cacao|type=mRNA|length=615bp
ATGGCAACGCAAGCAGGCCTCTTCACCCCCACAATCAGCACCCCGAAATC
CCTGGTGCCATGGAAGCCATCCTCGTCATTTTCATTCGCTACCCCCAAGT
CCCTCAACCTCTCCATGGCTCACAGTACCATTAGGGCTGCAGCTGCAGAC
CAGGAGGCTGCCACGAAGGAAGAAGCTCCCGTGGGCTTCACCCCTCCCGA
ATTGGACCCAAACACTCCATCACCCATTTTTTCAGGAAGCACGGGAGGGC
TGCTAAGAAAGGCCCAGGTTGAAGAATTCTACGTCATCACATGGGATTCA
CCCAGAGAACAAATCTTTGAAATGCCAACTGGAGGCGCAGCCATCATGAG
GCAAGGACCTAACTTGCTCAAGTTGGCCAGGAAAGAGCAGTGCTTGGCGC
TCGGTACCAGACTGAGGTCTAAGTACAAGATCAACTACCAGTTTTACAGG
GTTTTCCCCAATGGCGAGGTTCAATATCTTCACCCCAAAGATGGAGTTTA
TCCTGAGAAAGTGAACCCTGGTCGTCAAGGAGTGGGGCAGAACTTCAGAT
CAATTGGGAAGAATGTGAGTCCCATTGAGGTTAAGTTCACCGGGAAACAA
GTTTATGACTTGTAA
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protein sequence of Tc01v2_p023060.1

>Tc01v2_p023060.1 ID=Tc01v2_p023060.1|Name=Tc01v2_p023060.1|organism=Theobroma cacao|type=polypeptide|length=205bp
MATQAGLFTPTISTPKSLVPWKPSSSFSFATPKSLNLSMAHSTIRAAAAD
QEAATKEEAPVGFTPPELDPNTPSPIFSGSTGGLLRKAQVEEFYVITWDS
PREQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYR
VFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQ
VYDL*
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