Tc01v2_t021580.1

Overview
NameTc01v2_t021580.1
Unique NameTc01v2_t021580.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length684
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productethylene-responsive transcription factor 1B
NoteEthylene response factor 1, putative
Cross References
External references for this mRNA
DatabaseAccession
GeneID18613152
GenbankXM_018120474.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g021580Tc01v2_g021580Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p021580.1Tc01v2_p021580.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto48330auto48330Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto48331auto48331Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t021580.1 ID=Tc01v2_t021580.1|Name=Tc01v2_t021580.1|organism=Theobroma cacao|type=mRNA|length=684bp
ATGGATTCTTCCTTCCTTGAAAGCCTGAATTCAGAGTTCCAGCTAGAATC
TGGGCAAGATTTGTTAGAATCTTTCTCACCCAATAATGAGCTTTTCCTCG
ACCAAGATTTCTTTTCATTTGACATTATAGACTCCAAAGAGTTGCCTCCC
CAAGATACTACTCTTTATCATCATGGGTCAAGAGAATCATCAAACTCTTC
CTGTGGATTAATTATCGACGAAGAACATGTAGTTTCCAGTGCCAAGAAAC
GAGAAGAGCAACAACAACCCAAGGGGGAAAAATCATACAGAGGGGTAAGG
AAGCGACCTTGGGGAAAATACGCGGCGGAGATTAGGGATTCAACAAGGCA
TGGCATTCGGGTTTGGCTTGGAACATTTGACAGCGCAGAGGCAGCTGCTT
TAGCTTATGATCAAGCAGCCTTATCGACACAAGGGCCCAAGGCTGTGCTC
AACTTTCCTGTTGAAAGAGTCCGGGAATCGCTTCGGAACATGAATTACTA
CTGCAAGGATGGTGCCTCACCGGCAGTAGAACTAAAGCAGAGGAATTATG
TACAAAGAAAGTCAATGGCTAGGAAAAATAAAAAGAAGCAGTCACAAGCA
AAGAATGTGGTCGTCTTAGAAGATTTAGGATCTGAATATTTGGAGGAACT
TTTGAGCTCATCTCAAAGTACTAGCTCTTGGTAA
back to top

protein sequence of Tc01v2_p021580.1

>Tc01v2_p021580.1 ID=Tc01v2_p021580.1|Name=Tc01v2_p021580.1|organism=Theobroma cacao|type=polypeptide|length=228bp
MDSSFLESLNSEFQLESGQDLLESFSPNNELFLDQDFFSFDIIDSKELPP
QDTTLYHHGSRESSNSSCGLIIDEEHVVSSAKKREEQQQPKGEKSYRGVR
KRPWGKYAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAALSTQGPKAVL
NFPVERVRESLRNMNYYCKDGASPAVELKQRNYVQRKSMARKNKKKQSQA
KNVVVLEDLGSEYLEELLSSSQSTSSW*
back to top