|
|
Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
| Product | Fanconi anemia group D2 protein homolog, transcript variant X7 |
| Note | Uncharacterized protein |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t014960.7 ID=Tc01v2_t014960.7|Name=Tc01v2_t014960.7|organism=Theobroma cacao|type=mRNA|length=4467bp
ATGGTATTACTCCACAACCAAAATCCGTCTCGGAAGAGGCCCTCCTCCTC
TTTTGGCCCTCCTTTTCCTCCGGCCAAAATCCCCAAATCTCGAAACGACG
GCGTTGCGGTTGATGCAGTTGAAAGGATGGTTTCAATCTTAGCTGAGGGT
GGTTGTACTTTGATAAACCCCTTGGGCGCACCCTCCCTTCCCGCCGATCC
CTACAAGCTCCGCCGCTACCTCTCCGGCCTTTTTTCTTCTTCTTCTGAGG
ATCGCTCCCTCTTCCTCTCCGGTTTCTCGTCTTATATTCAATCCTCCTCC
AATCTTCGCAGGGTTCTCATTTCATCGGATGGAAGTAGTTTTGCTCCTAC
TAGAAGTGAGAGTTTAGTCCGACATCTCTTGCTGGTTGCACCAATCCAAT
TTGACCTTCAGATTATGCTGCTTGAGAAACTTCCAGAATATTTTGACATT
GTTTCTGGTGATTCACAAACATTATTGTCCCTCGAAGATGATGTTGCTAG
GCTTATCATCAATCATCTTCGGTGGCTTGATTTTGTTGTTGATCCTAGTT
CCTTTACCGATAAGTTAATGCAAGTCCTTTCCATTTGCCCTTTACACTTG
AAAAAGGAGATCATTGGATCATTGCCGGAGATCGTTGGTGATCAAAATAA
CAAGACTGTGATTGATTCCCTTGAACAAATGCTTCATGAGGACCCATCCA
TAATTGTTCCTGTGCTTGACTCATTTTCAAACTTCAATTTGGATGATCAG
TTGCAAGAACAGGTCATAACCATTGCACTATCATGCATTAGAACAATTGA
TGCGGAGCAAATGCCTTGTCTGCTTCGATTTTTACTGCTCTCTGCCACAC
AAGTAAATGTTCGAAGAATAATCTCACAAATACGTGAGCATTTAAAGTTT
CTCAGTGTGCCAAATACTCACACATTGCAAAAAAATAAACTCAAAGGGAA
GTTGCTTGTTGACAACACAGAGGCATCTATTCTAGATGCCTTGAGATCTA
GTCTTCAATTTAAGAGTATACTCTGTCAGGAGATTTTGAAGGAATTGAAT
GGCCTTGAGAAACCTCGAGATCACAAAATCATAGACATATGGTTGCTTGT
GCTATTGTACACAAATGGTGAGTCCATGCGAAAAAGCATTGAGAAGGTAT
TTAAGAAGAAAGTTATTGAAGGTTGCATTCAGGAAGTTATGCTTGATCAG
TGCATTTATGGGAACAAGGAACTGGCAAAGGAATATTTCCTGTCCTTGCT
TTCTTTATCTGAGTACCTATTGGCATGCAAAGAACAAAAGGCAAGGGATT
TTGGCATTTACATGTATACTCTTCTTTTTGAAGAGTTTGCTGATACTTAT
TCAAGACAGGAAGTTCTTGGTGCACTAGTCACTCATGTGGGCTCTGGTGT
CAAGTCTGAAGTAAGTTCTGCTCTGCAGGTTATGGCTTCACTGGCCACAA
AACATGCACAGGAATTAATTCCACTTTCTTCTCATATAAATGGAATCTTG
GACTACTTGGAGGGACTGACTGTTGAAAATCTTCATAAGGTTTACGAGGT
CTTCAGCCATATGGCACTGCTAGCTCGCTCTAGTTCTGACTGTTTTGGCT
CTTCCATTGCAAATGAACTCTTGATAATTGTTCAAAAGCAGCATCACCCT
GCAATTGGGCAGGTCAGCCATCCGGATCTGAAGTACAAAAAGATGGGCCT
CATTGGAATCTTGAAAATTGTTTCATGTCTTGGGGATGCAAGTAATGTCA
CATTATCATCACCTTTTCAGAAATCAAATACTGAGGAGGCCTTGGAGCTC
CTTGAAACATCCCTGGAATCTTGCAAACAGTTGTGCTTATCATTGATCTT
CTTTTACGATGAACTGACTGCAATTTTGGAAAGTAGAACTCTTCACACTG
TCATCGTGGACTGGATTGGCAAGCATGTAGGAGAATTTGAATCTATTTTC
CTGTCTGATCTTGATGGTGGCCAATTGCCTAGCAGGAATTCATATTGTGG
TTTAGAAGGGGAGCTATGGATGAACTTGGATGGTGAAATATCTCCTATTT
GTCTGAACATTCTGCCATTAGCTTCTTCTTCGCAGTCTGCTTGTTTGCAA
TTTCTTCCTGCTAACTTTCATTTACTATCAGCTGTTGAAAGGTTGACAAA
TCAAGGATCTCTTGGTGGAATTGATGCATTACTTGGCTGTCCTTTGCTCC
TTCCCTCGTCTAAGTACTACTCAGAAGCTGAATGGCTGTCTTTGACAGGA
AAGCAGAAACAGATTATTTCTCTCTGTCTTTATTATGCAGTAAACTGGCT
ACGGGAACTGCTTAATGCCTTCTGCACACAAGTAGCTGGAAGATTTGAAT
TTACAAGTCAGTCGACAAAAGAGGACATAACATTGAAGCTGTTAAAGCGA
TTGAGGAACCTAGTATTTCTGGAAAGCTTGTTAAATCATTCCATCAGAAT
GTGTCCTGTAGTACTACCTCAGCTCCATCTTCAAGTAGAGCATTGCGGAT
CGACGCTCATAAACCAACCAAACCATGTGGGGAATATGGAAAAGAAGAAT
GAGCCTAAGATGACACATGAATGCACATCCCCAAACAAAAGGAAGCATAA
AAAGATTGCGAAGACCTCAACGCCAGGTACAGATGGAAAACTTCACCAGC
CAACATTGATGGACGTGTTGAGGAAAGCAGGAGTAGAGACAAGCCAAGAG
ATGACAAATGAAGTTTCTTCAAAGGAGAGGACCTCAGCATCAGTAGATCG
GCAATCCCATGTCTTTAATGAATCAGTGCTTATAGAAGTTTCTCCACCTG
CACAAGCTCTGGAATCACAGAAATTTAGGTTCAGGCCTCTTTTATTGGAA
TGCTTCTCCATTTTGACCTTTTCAAAGAACCATGACTCCTGCTGCTCTGA
CCCTGTGGCTGAGTTACCCTTATACCTGTACCTCATTCATGATCTTCACT
GCAAGTTGGATTACTTTGCTGCCCCGGGGAAACAATGCTCCTCGAGAAGC
TTGAGTTCTGTTGCTTTTACCAGGATGACGTTGGATGAATTTCTTAGCAA
AATTAGACCACTCTTTCCAAGTCTTAAGAGAAATTTAGATATTGCATTCT
GTAGTCTTAAAGAAGGTAATGAAACTTGTCAAGAACACTGGAACATTCAA
TCTGCTGCTGCTCACAACCCAGATATAATCAACCTTGTCCCATCAAAATC
TTCAATTTCTACTATGGTGTATAAGGAAGTACTTCATAGTTTCAGTAAGT
TTTTCCTTGAGCAGATGCTAAACCTTCCTGAAGTACAAAGGAATAAATCA
GTTCTTTCAGATCTCCTTGAAGCCTTTCAGCCCAATGAAACATTAGATGC
TGGTGCTTCAGATGTACAGCCTTGTCCTTCACCTGGTACAATAGAGTATT
CATATCTTGGGGCTTGTTCATTTGTGGAAAGTATCCTCCATGCAGCATGT
TCTTTCTCCTTTATTCTGGCATCAGAGGCTCTTTTCACTCTGGAATCAGC
TGTTACATCAGTTTTAAATGTCGTTGATAAGTTGGAGGGAGATGATGTAA
ACATACAGTCAAGGTTTAACCAGATCCTTCCTTTCTTGCGTGGCAAACTT
GGATCGTCTGCTCAGAAACTTCTAAAGCATAAGTGGGATGACGAAAATCT
TGAGAATGGCTGGAAGAACAAAGGAGAAATAGTACAAAAGATACTGCGGA
TCCACTTGGAATATACTGAATCAACTGCTGATTTGCTAGATGAGCTTGCG
TGCACAATTTTGCCACAGGTTTCTTGTACAACAATGGCAGAAGATGAGGA
TTATGGTTACCCAACTCTATGTTCTGCAACATTTCTCTCCTGGTACCATG
TACTGTTTGAAGTGAACCTCACAGTTCTTGACAAATTGGTTAAGGAGGTT
GTTCACTTGGAGAAGTGCCGACCTGGTTTTCAACCCGAAAATGTTCACAC
ACATTTGATCAAGATGCAAAAGAACGTGAATGTGGTTGTTGCACTAGTTA
ACATGTGCAGAACCTATGACAAGGTCACCCTGCATGCCATGGCTGTCAAG
TATGGTGGGAAATTCATCGATTCCTTCCTTAAAGCTTTTGACTTCTTGCA
GGTTCACTTCCAAATGCATAATGAAGTCATAATTCTACTGGTGAAAGAAC
TTCAAAAGGCTACAAGAACAATTCAGACTCTATGTTCTGAAGCAAAGGGC
TTGAAGCAAACAGCCATCACTGGCAAAATACCTGCTACCAAAAGATCTTT
GGAACGCTTTTTGTTTCGTGTCAAGGCTCTTCTCCATACAACATCTAGTG
GATGCACTTTCTGGATGGGTAATCTAAAACACAAGGATCTCAGAGGTCAG
GTGGTGAGTTCCCAGGCATATGTAGATGATCGAAACGACAGCATTGATCA
AGATCCTGAGGATGTGGATCCACCAGTCATTGTTGCCACTGCTAGTGGAA
ACAGTGAAACAGACTGA back to topprotein sequence of Tc01v2_p014960.7 >Tc01v2_p014960.7 ID=Tc01v2_p014960.7|Name=Tc01v2_p014960.7|organism=Theobroma cacao|type=polypeptide|length=1489bp
MVLLHNQNPSRKRPSSSFGPPFPPAKIPKSRNDGVAVDAVERMVSILAEG
GCTLINPLGAPSLPADPYKLRRYLSGLFSSSSEDRSLFLSGFSSYIQSSS
NLRRVLISSDGSSFAPTRSESLVRHLLLVAPIQFDLQIMLLEKLPEYFDI
VSGDSQTLLSLEDDVARLIINHLRWLDFVVDPSSFTDKLMQVLSICPLHL
KKEIIGSLPEIVGDQNNKTVIDSLEQMLHEDPSIIVPVLDSFSNFNLDDQ
LQEQVITIALSCIRTIDAEQMPCLLRFLLLSATQVNVRRIISQIREHLKF
LSVPNTHTLQKNKLKGKLLVDNTEASILDALRSSLQFKSILCQEILKELN
GLEKPRDHKIIDIWLLVLLYTNGESMRKSIEKVFKKKVIEGCIQEVMLDQ
CIYGNKELAKEYFLSLLSLSEYLLACKEQKARDFGIYMYTLLFEEFADTY
SRQEVLGALVTHVGSGVKSEVSSALQVMASLATKHAQELIPLSSHINGIL
DYLEGLTVENLHKVYEVFSHMALLARSSSDCFGSSIANELLIIVQKQHHP
AIGQVSHPDLKYKKMGLIGILKIVSCLGDASNVTLSSPFQKSNTEEALEL
LETSLESCKQLCLSLIFFYDELTAILESRTLHTVIVDWIGKHVGEFESIF
LSDLDGGQLPSRNSYCGLEGELWMNLDGEISPICLNILPLASSSQSACLQ
FLPANFHLLSAVERLTNQGSLGGIDALLGCPLLLPSSKYYSEAEWLSLTG
KQKQIISLCLYYAVNWLRELLNAFCTQVAGRFEFTSQSTKEDITLKLLKR
LRNLVFLESLLNHSIRMCPVVLPQLHLQVEHCGSTLINQPNHVGNMEKKN
EPKMTHECTSPNKRKHKKIAKTSTPGTDGKLHQPTLMDVLRKAGVETSQE
MTNEVSSKERTSASVDRQSHVFNESVLIEVSPPAQALESQKFRFRPLLLE
CFSILTFSKNHDSCCSDPVAELPLYLYLIHDLHCKLDYFAAPGKQCSSRS
LSSVAFTRMTLDEFLSKIRPLFPSLKRNLDIAFCSLKEGNETCQEHWNIQ
SAAAHNPDIINLVPSKSSISTMVYKEVLHSFSKFFLEQMLNLPEVQRNKS
VLSDLLEAFQPNETLDAGASDVQPCPSPGTIEYSYLGACSFVESILHAAC
SFSFILASEALFTLESAVTSVLNVVDKLEGDDVNIQSRFNQILPFLRGKL
GSSAQKLLKHKWDDENLENGWKNKGEIVQKILRIHLEYTESTADLLDELA
CTILPQVSCTTMAEDEDYGYPTLCSATFLSWYHVLFEVNLTVLDKLVKEV
VHLEKCRPGFQPENVHTHLIKMQKNVNVVVALVNMCRTYDKVTLHAMAVK
YGGKFIDSFLKAFDFLQVHFQMHNEVIILLVKELQKATRTIQTLCSEAKG
LKQTAITGKIPATKRSLERFLFRVKALLHTTSSGCTFWMGNLKHKDLRGQ
VVSSQAYVDDRNDSIDQDPEDVDPPVIVATASGNSETD* back to top
|