Tc01v2_t014160.1

Overview
NameTc01v2_t014160.1
Unique NameTc01v2_t014160.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length654
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productglutathione S-transferase F9
NoteGlutathione S-transferase F9
Cross References
External references for this mRNA
DatabaseAccession
GeneID18612216
GenbankXM_007048888.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g014160Tc01v2_g014160Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p014160.1Tc01v2_p014160.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto31586auto31586Theobroma cacaoexon
exon-auto31587auto31587Theobroma cacaoexon
exon-auto31588auto31588Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto31589auto31589Theobroma cacaoCDS
CDS-auto31590auto31590Theobroma cacaoCDS
CDS-auto31591auto31591Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t014160.1 ID=Tc01v2_t014160.1|Name=Tc01v2_t014160.1|organism=Theobroma cacao|type=mRNA|length=654bp
ATGGTGGTGAAGGTTTATGGCCCAGCCTATGCTTCCCCAAAGCGTGTGCT
CGTGTGTCTTATTGAAAAGGAGGTTGAGTTTGAGACTGTCCCGGTTGATT
TGCTCAAAGGAGAGCACAAAGACCCTGAATACCTCAAGTTGCAGCCTTTT
GGAACAGTTCCTGTCACTCAAGATGGAGACTATACTTTATATGAATCCCG
TGCCATCATGAGGTACTACGCAGAAAAGTACAAGTCACAGGGAACTGATC
TGCTGGGGAAGACAGTCGAGGAAAGAGGTCTTGTTGAAAACTGGCTAGAG
GTCGAGGCACAGAGCTACAACCCACCAATGTTCACCCTGACCGTTCAAAT
CATGCTTTCCTCCAAGTTGGGGTTGCCTCGTGATGAAAACTTGATCAAAG
AGAGTGAGGAAAAGCTTGGCAAGGTGCTGGATATTTATGAGGAGAGGCTG
TCAAAGAGCAAGTACTTAGCTGGTAATTTCTTCAGCCTCGCTGACCTTAG
CCATTTGCCATTTACTCAGTACTTGGTGGATCATATGGGAAAGGAGTACA
TGATAAAGAGCAGGAAGCATGTTAGTGCTTGGTGGGATGATATTAGCAGC
AGACCTTCCTGGCAAAAGGTTCTCCAGCTCTACGCTGCTCCTTTCAAGAA
TTGA
back to top

protein sequence of Tc01v2_p014160.1

>Tc01v2_p014160.1 ID=Tc01v2_p014160.1|Name=Tc01v2_p014160.1|organism=Theobroma cacao|type=polypeptide|length=218bp
MVVKVYGPAYASPKRVLVCLIEKEVEFETVPVDLLKGEHKDPEYLKLQPF
GTVPVTQDGDYTLYESRAIMRYYAEKYKSQGTDLLGKTVEERGLVENWLE
VEAQSYNPPMFTLTVQIMLSSKLGLPRDENLIKESEEKLGKVLDIYEERL
SKSKYLAGNFFSLADLSHLPFTQYLVDHMGKEYMIKSRKHVSAWWDDISS
RPSWQKVLQLYAAPFKN*
back to top