Tc01v2_t011190.1

Overview
NameTc01v2_t011190.1
Unique NameTc01v2_t011190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2007
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmitogen-activated protein kinase kinase kinase YODA
NoteMitogen-activated protein kinase kinase kinase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611858
GenbankXM_007048325.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g011190Tc01v2_g011190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p011190.1Tc01v2_p011190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto23709auto23709Theobroma cacaoexon
exon-auto23710auto23710Theobroma cacaoexon
exon-auto23711auto23711Theobroma cacaoexon
exon-auto23712auto23712Theobroma cacaoexon
exon-auto23713auto23713Theobroma cacaoexon
exon-auto23714auto23714Theobroma cacaoexon
exon-auto23715auto23715Theobroma cacaoexon
exon-auto23716auto23716Theobroma cacaoexon
exon-auto23717auto23717Theobroma cacaoexon
exon-auto23718auto23718Theobroma cacaoexon
exon-auto23719auto23719Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto23720auto23720Theobroma cacaoCDS
CDS-auto23721auto23721Theobroma cacaoCDS
CDS-auto23722auto23722Theobroma cacaoCDS
CDS-auto23723auto23723Theobroma cacaoCDS
CDS-auto23724auto23724Theobroma cacaoCDS
CDS-auto23725auto23725Theobroma cacaoCDS
CDS-auto23726auto23726Theobroma cacaoCDS
CDS-auto23727auto23727Theobroma cacaoCDS
CDS-auto23728auto23728Theobroma cacaoCDS
CDS-auto23729auto23729Theobroma cacaoCDS
CDS-auto23730auto23730Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t011190.1 ID=Tc01v2_t011190.1|Name=Tc01v2_t011190.1|organism=Theobroma cacao|type=mRNA|length=2007bp
ATGCCTGCTTGGTGGGGTAAAAAGTCAAGTAAGAATAAAGAAGAGAGTCC
TCAAAATCAAAGCCCATGTGGCACTACCGTCGGATTAATCAAGTCTTCAC
CTAATAAAACCGATGCTGCTGCTATGGTGGCGGTGGCCGTGGCCGGCAGC
CGCGGTGGTGGTAAAAAGAAAGAAGCAGCAGCAGCAGCAGCCGCCGCCGA
CAAGGACAACAACAGCAACCGCCCAAAGAGCTTCGATGACGGAGGAGGGC
TTCTTTTAAGCGCCCGTAATTCGCCACGAGGCAGCAAGGATTTTGTCGCT
GTTGGTCGTGGGTCATCTGGGTTTTCGGGTTTCGATTCGGATTCAGGGGA
GAAAAGGGGGATTCCTTTGCCTAGACCATCTGTTTCGTCGATGCAAAGTG
ATCATGGAGTCGGGTTGGGATCTGGGTCGGCTTCAGTTTCTAGTGTTAGT
TCTAGTGGCTCTTATGAAGATAATCAGACTGCAAATGATCCGGTTCAATT
CCAGGCCTGCAGGCCATATATTGATCCCAGAAGCCAAGGTGAAATTAGAA
TGAACATGGGGTCGAGAAGCCCCGGTCCAGGGTCGAGAGGGGCAACCAGC
CCAACATCACCTCTTCATCATCGATTGTCTGGAGTGAGTCTCGAGTCTCC
TACAGGGAGAAAGGAAGATGGGAAGTCCCAGTGTCATAAGTTGCCTCTTC
CACCAGGTTCTCCTACTAGTCCTTCTTCTGTCTTGCCTAGCACAAGAACT
TATGGAGTGAGTGAAAATACGCCTTGTACTCTGTCGAAATGGCGAAAAGG
GAGACTCTTAGGGAGGGGAACCTTTGGACATGTTTACCTTGGATTTAATA
GTGAAAGTGGGCAGATGTGTGCAATAAAAGAAGTTAAGGTCGTTTCTGAT
GATCAGACATCAAAAGAATGCCTCAAGCAACTGAACCAGGAGATAAATTT
GCTGAGTCAGCTTTCACATCCAAACATTGTTCGATACTATGGAAGTGAAC
TGGGTGAAGAGACACTCTCGGTTTACTTGGAATATGTCTCTGGTGGTTCA
ATCCACAAATTACTTCAAGAATATGGTGCCTTTAAGGAACCTGTTATTCA
AAACTATACAAGACAACTTCTTTCTGGGCTTGCTTACTTACATGGAAGAA
ATACAGTGCACAGGGACATAAAAGGGGCAAACATATTAGCAGATCCTAAT
GGTGAAATCAAGTTGGCAGACTTTGGCATGGCAAAACACATAACAGCTTG
TAGTACAATGCTTTCGTTCAAGGGAAGTCCTTATTGGATGGCACCTGAGG
TTGTCATGAATACAAATGGCTACAACCTTGCTGTGGATATCTGGAGCTTG
GGTTGTACTATACTTGAAATGGCAACTTCAAAACCACCATGGAGTCAGTA
TGAAGGGGTGGCTGCAATATTTAAAATCGGAAACAGCAAAGATGTTCCTG
ATATTCCTGATCACCTTTCTAATGAAGCAAAAAATTTCATAAGGCTTTGC
TTGCAACGAGAACCATCAGCACGTCCTACAGCCTTGCAACTTCTAGATCA
CCCTTTCATTCGGGACCAAGCAACCACAAGAGTTGCTAACATCAGCATAA
CCAAGGATGCATTTCCTTACACTTTTGATGGAAGCCGCACTCCGCCCATA
CTAGAGCTGCAGTCAAACAGGAATAATATCCTCTCATTTGATGGAGATTA
TGGGACAAGGGGAGTGTCTGCAACATCAAGAGCTTTGAGGAGTCCAAGAG
ATAATGCAAGAACAATCACATCTTTGCCTGTGTCTCCTTCTTCAAGCCCA
TTAAGATATGCTCCAGCACACAAGAGTTGTTTTTATTCTCCTCCTCATCC
AGCTTATCAGTTTGTAGGACAGAGTGGTTACAACTTTGGTGACTTCTCTG
GGAGTGCATTGAGAACAAGTCCAAGATACACTCATGATCCTTGGCTTGAA
TCTTCACAACTAAAAGTCCAAACGCCAGGCACCTCGCCAAGAACGAGACC
TATTTGA
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protein sequence of Tc01v2_p011190.1

>Tc01v2_p011190.1 ID=Tc01v2_p011190.1|Name=Tc01v2_p011190.1|organism=Theobroma cacao|type=polypeptide|length=669bp
MPAWWGKKSSKNKEESPQNQSPCGTTVGLIKSSPNKTDAAAMVAVAVAGS
RGGGKKKEAAAAAAAADKDNNSNRPKSFDDGGGLLLSARNSPRGSKDFVA
VGRGSSGFSGFDSDSGEKRGIPLPRPSVSSMQSDHGVGLGSGSASVSSVS
SSGSYEDNQTANDPVQFQACRPYIDPRSQGEIRMNMGSRSPGPGSRGATS
PTSPLHHRLSGVSLESPTGRKEDGKSQCHKLPLPPGSPTSPSSVLPSTRT
YGVSENTPCTLSKWRKGRLLGRGTFGHVYLGFNSESGQMCAIKEVKVVSD
DQTSKECLKQLNQEINLLSQLSHPNIVRYYGSELGEETLSVYLEYVSGGS
IHKLLQEYGAFKEPVIQNYTRQLLSGLAYLHGRNTVHRDIKGANILADPN
GEIKLADFGMAKHITACSTMLSFKGSPYWMAPEVVMNTNGYNLAVDIWSL
GCTILEMATSKPPWSQYEGVAAIFKIGNSKDVPDIPDHLSNEAKNFIRLC
LQREPSARPTALQLLDHPFIRDQATTRVANISITKDAFPYTFDGSRTPPI
LELQSNRNNILSFDGDYGTRGVSATSRALRSPRDNARTITSLPVSPSSSP
LRYAPAHKSCFYSPPHPAYQFVGQSGYNFGDFSGSALRTSPRYTHDPWLE
SSQLKVQTPGTSPRTRPI*
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