Tc01v2_t008330.1

Overview
NameTc01v2_t008330.1
Unique NameTc01v2_t008330.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1029
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 85 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productserine/threonine-protein kinase SAPK2
NoteSerine/threonine-protein kinase SAPK2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18611521
GenbankXM_007047810.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc01v2_g008330Tc01v2_g008330Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc01v2_p008330.1Tc01v2_p008330.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto17950auto17950Theobroma cacaoexon
exon-auto17951auto17951Theobroma cacaoexon
exon-auto17952auto17952Theobroma cacaoexon
exon-auto17953auto17953Theobroma cacaoexon
exon-auto17954auto17954Theobroma cacaoexon
exon-auto17955auto17955Theobroma cacaoexon
exon-auto17956auto17956Theobroma cacaoexon
exon-auto17957auto17957Theobroma cacaoexon
exon-auto17958auto17958Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto17959auto17959Theobroma cacaoCDS
CDS-auto17960auto17960Theobroma cacaoCDS
CDS-auto17961auto17961Theobroma cacaoCDS
CDS-auto17962auto17962Theobroma cacaoCDS
CDS-auto17963auto17963Theobroma cacaoCDS
CDS-auto17964auto17964Theobroma cacaoCDS
CDS-auto17965auto17965Theobroma cacaoCDS
CDS-auto17966auto17966Theobroma cacaoCDS
CDS-auto17967auto17967Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc01v2_t008330.1 ID=Tc01v2_t008330.1|Name=Tc01v2_t008330.1|organism=Theobroma cacao|type=mRNA|length=1029bp
ATGGAGCGCTATGAAATACTGAAAGATATTGGGTCGGGGAACTTTGGTGT
TGCTAAGCTGGTTAGGGATAAATGGAGTGGTGGGCTTTATGCTGTCAAGT
ATATTGAAAGAGGCTCCAAGATTGATGAGCATGTTCAAAGGGAGATTATG
AACCATAGGTCCTTGAAGCATCCCAATATAATAAGATTCAAGGAGGTCCT
GCTAACACCAACTCATCTAGCCATAGTCATGGAGTATGCTGCTGGCGGAG
AACTTTTTGAAAGAATATGCAATGCTGGTAGATTCAGTGAGGATGAGGCA
AGATTTTTCTTTCAACAACTGATATCAGGAGTGAGTTACTGCCATGCAAT
GCAAATTTGTCATAGAGATCTTAAGTTGGAAAACACACTGTTAGATGGGA
GCACTGCACCGCGACTCAAAATATGCGACTTTGGCTACTCCAAGTCAAGT
GTGTTTCACTCCCAGCCCAAATCAACTGTAGGAACACCAGCCTACATCGC
GCCAGAGGTCTTGTCTAGAAAAGAATATGATGGGAAGATTGCAGATGTTT
GGTCTTGTGGGGTTACTTTGTATGTCATGCTGGTTGGGGCTTATCCTTTT
GAAGACCCTGAAGATCCTAGAAACTTCAGAAAAACAATTCAGCGGATTCT
GAGTGTCCACTATTCTATTCCTGATTACGTTCGAGTTTCCAAGGAGTGTA
GACATCTCCTATCCCGGATTTTTGTATCGAACCCCGAAAAGAGAATAACC
ATACCAGAAATCAAGCAGCAACCATGGTTTTTAAAGAACTTGCCAACAGA
ATTCGTGGAAGGAGAGGGTGGCAACCTGGAAACTGAAGAAGAAAATGACC
AATCTCAAAGTATTGAAGAAATATTGTCTATAATTGATGAAGCTAGGAAA
CCTGGTGAGGGCCCCAAAGTTAGTAGTCAGGCACTTGGTGGTAGCATGGA
TCTTGATGATATAGATGCTGATGCAGACATAGATGATATAGAGACAAGCG
GTGATTTTGTCTGTGCACTACAAGTGTGA
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protein sequence of Tc01v2_p008330.1

>Tc01v2_p008330.1 ID=Tc01v2_p008330.1|Name=Tc01v2_p008330.1|organism=Theobroma cacao|type=polypeptide|length=343bp
MERYEILKDIGSGNFGVAKLVRDKWSGGLYAVKYIERGSKIDEHVQREIM
NHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEA
RFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSTAPRLKICDFGYSKSS
VFHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPF
EDPEDPRNFRKTIQRILSVHYSIPDYVRVSKECRHLLSRIFVSNPEKRIT
IPEIKQQPWFLKNLPTEFVEGEGGNLETEEENDQSQSIEEILSIIDEARK
PGEGPKVSSQALGGSMDLDDIDADADIDDIETSGDFVCALQV*
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